Dyella thiooxydans: ATSB10_16850
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Entry
ATSB10_16850 CDS
T04308
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dtx
Dyella thiooxydans
Pathway
dtx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATSB10_16850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dtx03019
]
ATSB10_16850
Enzymes [BR:
dtx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ATSB10_16850
Messenger RNA biogenesis [BR:
dtx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ATSB10_16850
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AND69139
UniProt:
A0A161IVF1
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All DBs
Position
1810667..1812001
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AA seq
444 aa
AA seq
DB search
MSFESLGLAPALLRALTDQGYAEPTPVQAGSIPLVIAGHDLLAAAQTGTGKTAAFALPVI
HKLIDAGAPQTRRPRVLVLTPTRELAAQVNDNFRDYAKYVRVATTTIFGGVGMGPQINAL
RRGVDVVIATPGRLIDHMQQRTIDLGGIDTLVLDEADRMLDMGFLPALKRVLSALPKQRQ
TLLFSATFAPAIKALAMQFMREPKEVSVTPPNTVAPLVSHHVHPVDAARKRDLLLHVLAG
DSRRQTLVFSRTKHGADKLVKFLEVSGVRSAAIHGNKSQNARTRALSDFKSGRITVLVAT
DIAARGIDIDQLPMVINFDLPMVAEDYVHRIGRTGRAGSTGLAVSLVSHDESGLLRDILK
LVKQEIAIDPVAGFEPSAPLRLDPGAPKPVQGNQRQGRPGNRPSGQGKANPGHRPHGHVQ
AGAGGEHAAGNRTRRRRGRPAAKA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgaatcgctgggccttgcgcccgcgttgctgcgtgcgctgaccgaccagggc
tacgccgaacccacgccggtgcaggccggctccatcccgctggtgatcgccggtcacgac
ctgctggccgccgcccagaccggtaccggcaagaccgccgcgttcgccctgccggtgatc
cacaagctgatcgacgccggcgccccgcagacccgtcgcccgcgcgtgctggtgctcacc
ccgacccgcgagctggccgcccaggtcaacgacaacttccgcgactacgccaaatacgtc
cgcgtcgccaccaccaccatcttcggcggcgtcggcatggggccccagatcaacgccctg
cgccgcggcgtggacgtggtgatcgcgaccccgggccggctgatcgaccacatgcagcag
cgcacgatcgacctcggcggcatcgacacgctggtactggacgaggccgaccgcatgctc
gacatgggcttcctgccggcgctcaagcgggtgctctcggcgctgccgaagcagcgccag
acgctgctgttctcggcgaccttcgccccggcgatcaaggcgctggccatgcagttcatg
cgcgagccgaaggaagtctcggtgaccccgccgaacaccgtggcgccgctggtcagccac
cacgtgcatccggtggatgcggcgcgcaagcgcgacctgctgctgcacgtgctggccggt
gacagccgccgccagacgctggttttcagccgcaccaagcacggcgccgacaagctggtg
aagttcctggaggtgtccggcgtgcgctccgccgcgatccacggcaacaagagccagaac
gcacgcacccgtgccctgagcgacttcaagagcgggcggatcaccgtgctggtggccacc
gacatcgccgcccgcggcatcgacatcgaccagctgccgatggtgatcaatttcgacctg
ccgatggtcgccgaggactacgtgcaccgcatcggccgcaccggtcgcgccggctccacc
ggcctggcggtgtcgctggtcagccacgacgagtcgggcctcctgcgcgacatcctcaag
ctggtcaagcaggagatcgcgatcgatccggtcgccggcttcgaaccgtcggcgccgctg
cggctggatccgggtgcgcccaagccggtgcagggcaatcagcgccagggtcgcccgggc
aaccggccttcgggccagggcaaggcgaacccgggccaccgtccgcacggtcacgtgcag
gctggcgccggcggcgaacatgccgcgggcaatcgcacacggcgtcgccgcgggcgtccg
gcggccaaggcctga
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