Dyella thiooxydans: ATSB10_19410
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Entry
ATSB10_19410 CDS
T04308
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
dtx
Dyella thiooxydans
Pathway
dtx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ATSB10_19410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtx03021
]
ATSB10_19410
03400 DNA repair and recombination proteins [BR:
dtx03400
]
ATSB10_19410
Enzymes [BR:
dtx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ATSB10_19410
Transcription machinery [BR:
dtx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ATSB10_19410
DNA repair and recombination proteins [BR:
dtx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ATSB10_19410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF3231
Motif
Other DBs
NCBI-ProteinID:
AND69395
UniProt:
A0A161J2M3
LinkDB
All DBs
Position
complement(2060469..2064629)
Genome browser
AA seq
1386 aa
AA seq
DB search
MTYSFTEKKRIRKDFGKRPPVLGVPNLLTIQTDSYREFLQEHVAPKQRDEKGLHAALKSV
FPISSYSGNAALEYVDYRLGEPAFDERECRNRGMTFGAPLRVTVRLVIYDKDSPASKKAV
KYVKEQEVYMGEIPLMTDTGTFIINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLFSA
RVIPYRGSWLDFEFDPKDALFTRIDRRRKLPVTVLLRALGYTNEEMLNIFFEHNVFHLGK
KGGTTLELVAERLRGETLTFDLMIGDKVLVEAGKRITARHVRQLAAENITALEVPDDYPI
GRILAIDVVDAKTGELLAAANDEITAEHLEAFRKAGIETLPTLYVNDLDRGAYISHTLRI
DNTKTPLEALVEIYRMMRPGEPPTKDAAQNLFYNLFFTFDRYDLSAVGRMKFNRRVGRQD
ILGPGVLYDHKYFSERKEESAQELVAAQGETSDILDVLKVLIDIKNGHGTVDDIDHLGNR
RVRSVGEMAENTFRIGLVRVERAVRERLSLAESDGLTPQDLINAKPVAAAVKEFFGSSQL
SQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGL
INSLAVYARTNSYGFLETPYRKVENGKVTDKVDYLSAIEEGDHVIAQANSPLDKHGAFIE
DFVSCRFRGESELRPAKEVDYMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVP
TLRSQTPVVGTGIERAVARDSGVIVTAKRGGVIDQVDAARIVVRVNEEEVGDNDAGVDIY
TLTKYTRSNQNTNLNQRPLVNVGDVVAKGDTLADGSSTDLGELALGQNMLIAFMPWNGYN
FEDSILLSERVVQEDRYTSIHIEELSCIARDTKLGAEEITADIPNVGEQALARLDESGIV
YIGAEVKAGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDV
QVFTRDGIEKDKRAKQIEETEIKRIRKDLDDQFRILEGAIYNRMRMQLVGKSAMSGPGGL
KRGAEITDAYLDGLKKDDWFKINVKDEDVTEFLERAADQVKRHKEEFDKRFKEKQGKITQ
GDDLAPGVLKMVKVFLAVKRRIQPGDKMAGRHGNKGVVSNVVPVEDMPHMADGTSVDICL
NPLGVPSRMNIGQILEVHLGWAAKGLGKKIQKMLEAQEKVTKIREFLDQIYNHHVSGAVQ
HVDLKSLTDQEILTLANNLQDGVPMATPVFDGAEESEIKAMLKLADLPESGQTTLFDGRT
GEAFDRPVTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWA
LEAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGNHEMTAGMPESFNVLVKEIRSLGIDI
DLEEIK
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgacctactcgtttaccgagaagaagcgcatccgcaaggatttcggcaagcgtccgccc
gtgctgggcgtgcccaacctgctgaccatccagaccgactcctatcgcgaattcctgcag
gagcatgtcgccccgaagcagcgcgatgaaaagggtctgcacgcggccctgaagtcggtt
ttcccgatctccagctactccggcaatgccgcgctcgagtacgtcgattaccgcctcggc
gagccggcgttcgacgagcgtgagtgccgcaaccgtggcatgaccttcggcgcgccgctg
cgcgtgaccgtgcgcctggtcatctacgacaaggacagcccggcgtcgaagaaggcggtg
aagtacgtcaaggagcaggaggtctacatgggcgagatcccgctcatgaccgacaccggc
accttcatcatcaacggcaccgagcgcgtgatcgtctcgcagctgcatcgttcgccgggc
gtgttcttcgaccacgaccgcggcaagacgcacagttcgggcaagctgctgttctccgca
cgcgtgatcccctaccgcggctcctggctggacttcgagttcgacccgaaggacgcgctg
ttcacccgtatcgaccgtcgccgcaagctgccggtgacggtgctgctgcgcgcgctgggt
tacaccaacgaggagatgctgaacatcttcttcgaacacaacgtgttccacctgggcaag
aagggtggcaccacgctggagctggttgccgagcgcctgcgcggtgagaccctcacgttc
gacctgatgatcggcgacaaggtgctggtggaagccggcaagcgcatcactgcgcgccac
gtgcgtcagctggcggccgagaacatcacggcgctggaagtgccggacgattacccgatc
ggtcgcatcctggcgatcgacgtcgtcgacgccaagaccggcgagctgctggctgcggcc
aacgacgagatcaccgctgagcacctcgaggcgttccgcaaggccggcatcgagacgctg
ccgaccctgtacgtgaacgacctcgaccgcggtgcctacatctcgcacaccctgcgcatc
gacaacaccaagacgccgctcgaggcgctggtggagatctaccgcatgatgcgtccgggc
gagccgccgaccaaggacgccgcgcagaaccttttctacaacctgttcttcaccttcgac
cgctacgacctgtcggcggtcggtcggatgaagttcaaccgtcgcgtcggtcgccaggac
atcctgggtccgggcgtgctctacgaccacaagtacttctccgagcgcaaggaagagagt
gcgcaggagctggtggccgcgcagggcgagacgtcggacatcctcgacgtgctcaaggtg
ctgatcgacatcaagaacggccacggcaccgtggacgacatcgaccacctgggcaaccgc
cgtgtgcgctcggtcggcgagatggccgagaacaccttccgcatcggcctggtgcgcgtc
gagcgtgccgtgcgtgagcgcctgtcgctggccgagtccgatggactgaccccgcaggac
ctgatcaacgccaagccggtggccgcggcggtgaaggagttcttcggctcctcgcagctg
tcgcagttcatggaccagaacaacccgctgtcggaagtgacgcacaagcgtcgcgtctcg
gccctcgggccgggcggcctgacccgtgagcgtgccggcttcgaggtgcgcgacgtgcac
ccgacccattacggccgcgtctgcaccatcgagaccccggaaggcccgaacatcggcctg
atcaactcgctggccgtgtacgcccgcaccaattcctacggcttcctcgagacgccgtac
cgcaaggtcgagaacggcaaggtgaccgacaaggtcgattacctgtccgcgatcgaggag
ggcgaccacgtgatcgcccaggcgaactcgcctctggacaagcacggcgccttcatcgag
gacttcgtgtcctgccgcttccgcggcgagtccgagctgcgcccggcgaaggaagtcgac
tacatggacgtctcgccgatgcagaccgtgtcggtcgcggcggcgctggtgccgttcctg
gagcacgacgacgcgaatcgcgcgctgatgggcgcgaacatgcagcgccaggcggtgccg
acgctgcgttcgcagaccccggtggtgggtaccggcatcgagcgcgccgtggcgcgtgac
tcgggcgtcatcgtcaccgccaagcgcggcggcgtgatcgaccaggtcgacgcggcccgc
atcgtggtgcgcgtgaacgaggaagaggtcggcgacaacgatgccggcgtcgacatctac
accctgaccaagtacacccgctccaaccagaacaccaacctcaaccagcgtccgctggtg
aacgtgggtgacgtggtggcgaagggcgacacgctggccgatggttcgtcgaccgacctg
ggcgagctcgcgctcggccagaacatgctgatcgccttcatgccgtggaacggctacaac
ttcgaagactcgatcctgctctccgagcgcgtcgtgcaggaggaccgctacacctcgatc
cacatcgaggagttgtcctgcatcgcgcgcgacaccaagctgggtgccgaggaaatcacc
gccgacatcccgaacgtgggcgagcaggcgctggcgcgcctggacgagtcgggcatcgtc
tacatcggtgccgaggtgaaggccggcgacatcctggtcggcaaggtcacgccgaagggc
gagagccagctgacccctgaagagaagctgctgcgcgcgatcttcggcgagaaggcgtcc
gacgtgaaggacagctcgctgcgcgtgccgccgggcatggacggcaccgtcatcgacgtg
caggtgttcactcgcgatggtatcgagaaggacaagcgcgccaagcagatcgaggaaacc
gagatcaagcgcatccgcaaggacctcgacgaccagttccgcatcctcgagggcgccatc
tacaaccgcatgcgcatgcagctggtcggcaagtccgcgatgagcggcccgggcggtctc
aagcgcggtgccgagatcaccgacgcctacctggacggcctgaagaaggacgactggttc
aagatcaacgtcaaggacgaggacgtcaccgagttcctcgagcgtgcggccgatcaggtc
aagcgccacaaggaggagttcgacaagcgcttcaaggagaagcagggcaagatcacccag
ggcgacgacctcgcgccgggcgtgctgaagatggtcaaggtgttcctggccgtgaagcgc
cgcatccagccgggcgacaagatggccggtcgccacggcaacaagggcgtggtgtccaac
gtggtgccggtggaagacatgccgcacatggcggacggcacctcggtcgacatctgcctg
aacccgctgggcgtgccgtcgcgcatgaacatcggccagattctggaagtgcatctgggc
tgggccgccaagggcctgggcaagaagatccagaagatgctcgaggcgcaggagaaggtc
accaagatccgcgagttcctcgaccagatctacaaccaccacgtctccggcgcggtgcag
cacgtcgacctcaagtcgctgaccgatcaggagatcctgaccctggcgaacaacctgcag
gacggcgtgccgatggcgacgccggtgttcgacggcgccgaggagtccgagatcaaggcg
atgctgaagctggcggatctgcccgagtcgggccagaccacgctgttcgacggccgcacc
ggcgaggcgttcgatcgcccggtcaccgtcggctacatgcactacctgaagctcaaccac
ctcgtcgacgacaagatgcacgcgcgctcgaccggcccgtactcgctcgtcacccagcag
ccgctgggcggcaaggcgcagttcggcggccagcgcttcggtgagatggaagtctgggcg
ctggaagcctacggcgcggcctacaccctgcaggaaatgctgacggtgaagtccgacgac
gtgcagggccgcaaccagatgtacaagaacatcgttgacggcaaccacgagatgacggcg
ggcatgccggaatccttcaacgtgctggtgaaggaaatccgttcgctcggtatcgacatc
gacctggaagagatcaagtaa
DBGET
integrated database retrieval system
