Dyella thiooxydans: ATSB10_20510
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Entry
ATSB10_20510 CDS
T04308
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
dtx
Dyella thiooxydans
Pathway
dtx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATSB10_20510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtx03400
]
ATSB10_20510
DNA repair and recombination proteins [BR:
dtx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATSB10_20510
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ATSB10_20510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
UB2H
AAA_30
IF2_N
Kinesin
Motif
Other DBs
NCBI-ProteinID:
AND69505
UniProt:
A0A161JD49
LinkDB
All DBs
Position
complement(2173683..2175713)
Genome browser
AA seq
676 aa
AA seq
DB search
MTERFELVSPYQPSGDQPQAIERLSEGFEAGLAAQTLLGVTGSGKTYTIANVIQRVQRPT
IVMAPNKTLAAQLYGEFKEFFPHNAVEYFVSYYDYYQPEAYVVASDTFIEKDASINEHIE
QMRLAATKALLSRRDSIIVATVSAIYGLGNPEDYLSLRLILARGERIEQRQLIRQLTELQ
YSRNEMELRRGTYRVRGEIIDVFPAESETEALRIELFDGEVENLALFDPLTGEVLRKVPR
YTVYPRTHYASTRESVLNAIETIKVELKERLDQLYAANKLLEAQRLDQRTRFDIEMMAEV
GYCQGIENYSRHLTRRLPGEPPPTLFDYLPPDGLLVVDESHVTVPQLGAMYKGDRSRKET
LVEFGFRLPSAMDNRPLRFEEWEQRVPRAIYVSATPRDYELQKSGDAVVELVVRPTGLVD
PEVEVRPVRTQVDDLLGEVRKQIALGDRTLVTTLTKRMAENLTEYLAEHDIKVRYLHSDI
ETVERSEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAVLDADKEGFLRSTGSLIQTIG
RAARNVRGRAILYADEVTRSMQAAMDETARRREKQIAWNAANGITPQTVVRRIADIMEGA
RSEAPARGRGKRGAGRDRDKAVAEPAAGYESLSPQQLSAAIKKLEGQMYKHAQNLEFEEA
ARIRDQIGKLREQALR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacgattcgagcttgtttccccctaccagccctccggcgaccagccgcaggcg
atcgagcgcctcagcgagggcttcgaggccgggctggcggcgcagacgctgctcggcgtg
accggttcgggcaagacctacaccattgccaacgtgatccagcgggtgcagcggccgacc
atcgtgatggcgccgaacaagacgctggcggcgcagctgtacggcgagttcaaggagttc
ttcccgcacaacgcggtggagtacttcgtcagctactacgactactaccagcccgaggcc
tacgtggtggcgtcggacaccttcatcgagaaggacgcctcgatcaacgagcacatcgag
cagatgcggctggcggcgaccaaggcgctgctgtcgcggcgcgattcgatcatcgtggcc
acggtgtcggcgatctacggcctgggcaatccggaagattacctctcgttgcggctgatc
ctcgcccgcggcgagcgcatcgagcagcgccagctgatccgccagctcaccgagctgcag
tacagccgcaacgagatggagctgcgccgcggcacctaccgcgtgcgcggcgagatcatc
gacgtgttcccggccgagtcggagaccgaggcgctgcgcatcgaactgttcgacggcgag
gtggagaacctggcgctgttcgacccgctgactggcgaggtgctgcgcaaggtgccgcgc
tacacggtttacccccgcacccattacgcctcgacccgcgagagcgtgctcaacgcgatc
gagacgatcaaggtggagctgaaggagcggctggatcagctctacgccgccaacaagctg
ctcgaggcgcagcggctggaccagcgcacccgcttcgacatcgagatgatggccgaggtc
ggctactgccagggtatcgagaactactcgcgccacctgacccgccgcctgcccggcgag
ccgccgccgaccctgttcgactacctgccgcccgatggcctgctggtggtcgacgagtcg
cacgtcaccgttccccagctcggcgccatgtacaagggcgaccgctcgcgcaaggaaacc
ctggtggagttcggcttccgcttgccgtcggcgatggacaaccgtccgctgcgcttcgag
gagtgggagcagcgcgtgccgcgggcgatctacgtgtcggcgacgccgcgcgactacgag
ctgcagaagtccggcgacgcggtggtcgagctggtggtccgcccgaccggcctggtcgat
ccggaagtggaggtgcggccggtgcgcacccaggttgacgatttgctcggcgaggtacgc
aagcagatcgcgctgggcgaccgcaccctggtcaccacgctgaccaagcgcatggccgag
aacctcaccgaatacctcgccgagcacgacatcaaggtgcgctacctgcattcggacatc
gagacggtggagcgcagcgagatcatccgcgacctgcgcctgggcgagttcgacgtgctg
gtgggcatcaacctgctgcgcgagggcctggacatgccggaggtctcgctggtggcggtg
ctggacgccgacaaggaggggttcctgcgctccaccggttcactgatccagaccatcggc
cgcgccgcccgcaacgtgcgcggccgggcgatcctctacgccgacgaggtgacccgttcg
atgcaggcggcgatggacgagaccgcgcgccgccgcgaaaagcagatcgcctggaacgcg
gccaacggcatcacgccgcagaccgtggtgcggcgtatcgccgacatcatggagggcgcc
cgcagcgaggcgccggcccgcggacggggcaagcgcggtgccgggcgcgaccgagacaag
gcggtggccgagccggcggcgggctacgaatcgctcagtccgcagcagctgtcggcggcg
atcaagaagctggaagggcagatgtacaagcacgcccagaacctcgagttcgaggaggcg
gcgcggatccgcgaccagatcggcaagctgcgggagcaagcgctgcgctag
DBGET
integrated database retrieval system
