Dyella thiooxydans: ATSB10_24440
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Entry
ATSB10_24440 CDS
T04308
Name
(GenBank) exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dtx
Dyella thiooxydans
Pathway
dtx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ATSB10_24440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtx03400
]
ATSB10_24440
Enzymes [BR:
dtx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ATSB10_24440
DNA repair and recombination proteins [BR:
dtx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ATSB10_24440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
RecD_N
SLFN-g3_helicase
AAA_16
PhoH
AAA_28
nSTAND3
NTPase_1
DEAD
Mg_chelatase
AAA_5
DO-GTPase1
TrwB_AAD_bind
AAA
Motif
Other DBs
NCBI-ProteinID:
AND69898
UniProt:
A0A160N374
LinkDB
All DBs
Position
complement(2608880..2610682)
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AA seq
600 aa
AA seq
DB search
MSAYRFVPSPLELTTDAPWRPLDRAVLRWTLGHGGSPLLAKMAAWASYADGEGDTALPLS
GDGPGRHGMPRPDAEALAALRTEPLVGDGHVPTPYVIDADDRFYLWRNHAHEVAVANAVR
TRRAAAVPTSADEALIDTLFHGDRSDAVQRQREAVAAVAGRRLFVLTGGPGTGKTTTVLR
MLLALQWQAAGATLSIQVAAPTGKAAQRLVQSLRQGKQALAAQLDEGWSSALAAIPDSEA
LTLHRLLGYDPRRNRFTCDAAHPLAADVVVVDEASMVDLAMLRALLDAVRPEATLVLVGD
ADQLTSVAAGSVLMDLVSAFEADPRGDLVRLEHSFRAERQLVPINRAVREGDGCALREAM
DAASEDARWREVADAAALRRALAAWCEPLAALPIRPELPPRDEANTEARAAIAVQGLRAL
AQRQLLSALREDGFGALALNGWIEQRLKQLWSVPPDRSWYAGRAVLVTRNDYAARLYNGD
VGLCLAEPDGSLRVWFETVDEHGRASARSFAPGTLPPHEGGFAITVHKSQGSEYDLAAVL
LPPDPEHRLLSRQLLYTGLSRARRQVELWGTGEAVAAALDRPVQRAGGLAARLLREDGGG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctaccgcttcgtgccctcgccgctggagctgacgaccgacgcaccgtggcgt
ccgctcgaccgcgccgtgctgcgctggaccctgggccacggcggctcgccgctgctggcg
aagatggccgcgtgggccagctatgccgacggcgaaggcgatacggctctgccgctgtcg
ggcgacggcccgggtcgtcacggcatgccgcgaccggatgccgaggcattggccgcgctg
cgcaccgaaccgctggtcggtgacggccacgtaccgacgccgtacgtgatcgatgccgac
gatcgcttctatctgtggcgcaaccacgcccacgaagtcgcggtggcgaacgcggtgcgc
acgcgacgcgcggcggccgtgcccacatcggccgacgaggccttgatcgacacgctgttc
cacggcgaccgctccgacgccgtgcagcgccagcgcgaggcggtcgccgcggtggccggg
cgccggctgttcgtgctcaccggtggccccggcaccggcaagaccaccaccgtgctgcgc
atgctgctggcgctgcagtggcaggcggccggcgcgacgctgtcgatccaggtcgccgcg
ccgaccggcaaggcggcgcagcggctggtgcagtcgttgcggcagggcaagcaggcgctg
gcggcccagctcgacgaaggctggagcagcgcactcgcggcgattcccgacagcgaggcg
ctgaccctgcatcgcctgctcggctacgacccgcggcgcaaccgctttacctgcgacgcc
gcccatccgctggccgccgacgtggtggtggtggacgaggcctcgatggtcgacctggcc
atgctgcgcgccctgctcgatgcggtgcggccggaggccaccctggtgctggtgggcgat
gccgaccagctcacctcggtcgccgccggctcggtgctgatggatctggtgagcgcgttc
gaggccgatccgcgcggcgacctggtgcggctggagcacagcttccgcgccgagcggcag
ctggtgccgatcaaccgggccgtgcgggagggtgacgggtgcgcgctgcgcgaggcgatg
gatgccgccagcgaggatgcgcgctggcgcgaggtggccgacgccgcggcactgcgccgt
gcgctggccgcctggtgcgagccgctggcggccttgccgatccgtcccgaactgccaccg
cgcgacgaggcgaacaccgaggcgcgcgcggcgatcgccgtgcagggcttgcgagccctg
gcgcagcgccagctgctgtcagcactgcgcgaggacggctttggcgcgctcgccctcaac
ggctggatcgagcagcgcctgaagcagctctggagcgtgccgccggaccgcagctggtac
gccggccgcgccgtgctggtgacccgcaacgactacgccgcgcgcctgtacaacggcgat
gtcgggctgtgcctggccgagccggacggttcgctgcgggtgtggttcgagacggtggac
gaacacggccgcgccagcgcgcgcagtttcgcccctggcacgctgccgccgcacgaaggc
ggcttcgccatcaccgtgcacaagagccagggttcggaatacgacctcgccgcggtgctg
ctgccgcccgatcccgagcaccgcctgctgtcgcgccagctgctctacaccggcctgtcg
cgcgccaggcggcaggtcgagctgtggggtacgggcgaggcggttgcggcggcgctggat
cgaccggtgcagcgcgccggtgggctggccgcgagattgttgcgggaggacggcggcggc
tga
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