Dyella thiooxydans: ATSB10_25320
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Entry
ATSB10_25320 CDS
T04308
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dtx
Dyella thiooxydans
Pathway
dtx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATSB10_25320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtx03021
]
ATSB10_25320
03019 Messenger RNA biogenesis [BR:
dtx03019
]
ATSB10_25320
Transcription machinery [BR:
dtx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ATSB10_25320
Messenger RNA biogenesis [BR:
dtx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ATSB10_25320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AND69986
UniProt:
A0A160N272
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All DBs
Position
2707873..2709654
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AA seq
593 aa
AA seq
DB search
MSDIESKAPHDADGAENRPASEPRQRAPRKSAAAKSAVAEASANAPASAAPAPAGPAPAA
PAPVQASLPVDRPAPANPAPSAQSQATPAASPAPAPQGGGQPQGQAPQGGGNGGGGGNQG
GNERRNDRNDRNDRGRRRRHERGPRGNQGGGQRNPNGLPMDDDETGDVGSNDNLINLTEL
KRMKAPQLLAFAESLGIQEGVARQRRQDVIFNILKAHARAGGGIWAEGVLEILQDGFGFL
RSADESYLAGPDDIYVSPSQIRRFNLRTGDYITGRVRHPKEGERYFAMLRVDDINGDPPE
ASKNKMLFENLTPLFPRKAYKLERGNGSSEDITGRILDLVAPIGKGQRGLIVSQPKSGKT
MMLQNIAQAIQYNHPEAHLIILLVDERPEEVTEIARTVRAEVISSTFDEPAVRHVQVAEM
VIERAKRLVEHKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAAR
NVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMEVHLSRRIAEKRVYPAIDINRSGT
RREDLLIDPDLLAKIWILRKLLHPMDELAAMEFMLDKMKSTKSNDEFFNSMKR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgatatcgaaagcaaagcaccccacgacgccgacggcgccgagaaccggcctgcc
agcgaaccccgccagcgtgcaccacgcaagagcgcggccgccaagtctgcggtcgccgaa
gcatcggcaaacgcgccggcttcggccgcgcccgcaccggccggaccggccccggccgct
ccggcgccggtccaggccagcctgccggtggatcgcccggcaccggcgaaccccgcccct
tcggcgcagtctcaggcgactccggcggcgagtcccgcgccggcaccccagggcggcggg
cagccgcagggccaggcgccccaggggggcggcaatgggggaggcggcggcaatcagggc
ggcaacgaacgccgcaacgaccgcaatgatcgcaacgaccgcggccggcgccggcgccac
gagcgcggaccgcgcggcaaccagggaggcggccagcgcaatccgaacggcctgccgatg
gacgacgacgagaccggcgacgtcggcagcaacgacaacctgatcaacctcaccgaactc
aagcgcatgaaggcgccgcagctgctggccttcgccgagtcgctgggcatccaggagggc
gtggcgcgccagcgtcgccaggatgtgatcttcaacatcctcaaggcgcacgcccgcgcc
ggcggcggaatctgggccgagggcgtgctggagatcctgcaggacggcttcgggttcctg
cgctcggccgacgagagctacttggccggtcccgacgacatctacgtcagccccagccag
atccgccgcttcaacctgcgcaccggcgactacatcaccgggcgcgtgcgccatccgaag
gaaggcgagcgctacttcgccatgctgcgcgtcgacgacatcaacggcgatccgccggaa
gcgtcgaagaacaagatgctgttcgagaacctcaccccgctgttcccgcgcaaggcctac
aagctggagcgcggcaacggttcgagcgaggacatcaccggccgcatcctcgacctggtc
gcgccgatcggcaagggccagcgtggcctgatcgtctcccagcccaagtcgggcaagacg
atgatgctgcagaacatcgcccaggcgatccagtacaaccaccccgaggcgcacctgatc
atcctgctggtcgacgagcgaccggaggaagtgaccgagatcgcccgcaccgtgcgcgcc
gaggtgatctcctcgacgttcgacgagccggcggtgcgccacgtgcaggtcgccgaaatg
gtgatcgagcgcgccaagcgcctggtcgagcacaagaaggacgtgatcatcctgctcgac
tcgatcacccgcctggcccgcgcctacaacaccgtggtgcccagctccggcaaggtgctc
accggtggcgtggacgccaacgcgctgcagcgcccgaagcgcttcttcggcgccgcgcgc
aacgtcgaggaaggcggcagcctgaccatcatcgccaccgcgctgatcgacaccggctcg
aagatggacgaggtgatctacgaggagttcaagggtaccggcaacatggaggtgcacctg
agccgccgcatcgccgagaagcgcgtctatccggccatcgacatcaaccgctccggcacc
cgccgcgaggatctgctgatcgacccggacctgctggccaagatctggattctgcgcaag
ctgctgcatccgatggacgagctggccgcgatggagttcatgctcgacaagatgaagagc
accaagtccaacgacgagttcttcaactcgatgaagcgctga
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