Dyella thiooxydans: ATSB10_27360
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Entry
ATSB10_27360 CDS
T04308
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dtx
Dyella thiooxydans
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dtx03032
]
ATSB10_27360
03400 DNA repair and recombination proteins [BR:
dtx03400
]
ATSB10_27360
Enzymes [BR:
dtx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ATSB10_27360
DNA replication proteins [BR:
dtx03032
]
Prokaryotic type
DNA Topoisomerases
ATSB10_27360
DNA repair and recombination proteins [BR:
dtx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ATSB10_27360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AND70190
UniProt:
A0A160N2Z8
LinkDB
All DBs
Position
complement(2924471..2926954)
Genome browser
AA seq
827 aa
AA seq
DB search
MAKNLLIVESPAKAKTINKYLGKDFQVLASYGHVRDLKPKEGAVDTEHDFAMKYEVIERN
EKHVDAIAKAAKAADDIYLATDLDREGEAISWHISEILKERGLVEGKRMHRVVFSEITPK
AIKAAVAEPRQLSHDMVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFVAREYWTVEAQLKHPDADFSARLTQLNGKKFEQFDLTNEADAMAARAALKE
AAHGRLTVSEVGSKERKRRPAPPFTTSTLQQEAARKLGFSTSRTMKVAQGLYEGVSLGSE
GNVGLISYMRTDSVALAEDAVVELRQLIARDFGAKALPDHPQAYKSKAKNAQEAHEAIRP
TSAMRTPREVASFLNDEQRKLYELIWKRTVACQMIHATLNTVSVDFALPDASGGPAAFRA
TGTTVIDPGFLAVYEEGRDQKNAEDDDEGRRLPRLAKGEQVALADILADQHFTEPPPRYS
EASLVKALEEYGIGRPSTYASIIQVLLNREYVLLDSRRFKPTDVGRAVGKFLVQHFTRYV
DYDFTAKLEDELDAVSRGEEAWVPLMERFWQPFKQQVDEKTESVDRSEATGARELGTDPK
SGKPVSVRLGRYGPYAQIGDKDTDEKLQFASLRPGQSMHTITLEQALELFKLPRKLGQAE
NGDEVSVGIGRFGPFVKQGSTYASLKPEDDPYTIELPRALQIVAEKLEMLANRVIQDFGN
GVQVLNGRYGAYITDGEKNARIPKDTEPKDLTEAQCLELLAAAPVKKGRFAKKTAAKKTA
EKKAPAAKKATTKKAPAKKAAAKKTAAKKTATRKAAAKKTAAKSSGD
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaacctgcttatcgtcgagtcccctgcaaaggccaagacgatcaacaaatac
ctcggcaaggacttccaggtcctcgcctcctacggccatgtgcgcgatctgaagccgaag
gagggggcggtcgataccgaacacgacttcgcgatgaagtacgaggtgatcgagcgcaac
gaaaagcacgtcgacgcgatcgccaaggcggccaaggcggccgatgacatctacctcgcg
accgacttggatcgcgagggcgaggcgatcagctggcacatcagcgagatcctgaaggag
cgtggcctggtcgagggcaagcgcatgcaccgggtggtgttctccgagatcacgccgaag
gcgatcaaggccgcggtggccgagccgcggcagctgtcgcacgatatggtcgacgcccag
caggcgcgccgcgcgctggactacctggtcggtttcaacctgtcgccggtgctttggcgc
aaggtgcagcgcggcttgtccgccggccgcgtgcagagcccggcactgcgcatgatcgtc
gagcgggaggaggagatcgaagccttcgtcgcccgtgagtactggacggtcgaggcccag
ctgaagcatcccgacgccgacttcagcgcccgcctgacccagctcaacggcaagaagttc
gagcagttcgacctcaccaacgaagccgacgcgatggccgcccgcgccgcgctgaaggag
gccgcccatggccgcctgacggtgagcgaggtcggttcgaaggagcgcaagcgtcgcccc
gctcccccgttcaccacctccacgctgcagcaggaggccgcgcgcaagctgggcttctcc
accagccgcacgatgaaggtggcgcagggcctgtacgagggcgtgtcgctcggcagcgag
ggcaacgtcggcctgatcagctacatgcgtaccgactcggtcgcgctggccgaggacgcg
gtggtcgagctgcgccagctgatcgcccgcgatttcggggccaaggcgctgccggaccat
ccccaggcgtacaagtccaaggccaagaacgcgcaggaggcccacgaggcgatccgcccg
acctcggcgatgcgcacgccgcgcgaggtggcctcgttcctcaacgacgagcagcgcaag
ctgtacgagctgatctggaagcgtaccgtcgcctgccagatgatccacgccaccctcaac
acggtctcggtggacttcgccctgccggatgcttccggcggtccggcggcgttccgcgcc
accggtaccacggtgatcgatccgggcttcctggccgtgtacgaggaaggtcgcgaccag
aagaatgccgaggacgacgacgaaggccgccgcctgccgcggctggccaagggcgagcag
gtggccctggccgacatcctcgccgaccagcatttcaccgagccgccgccgcgctattcg
gaagcgagcctggtgaaggcgctggaggaatacggcatcggccgcccctcgacttatgcc
agcatcatccaggtgctgctcaaccgcgagtacgtgctgctggacagccgtcgcttcaag
ccgaccgacgtcggtcgcgcggtgggcaagttcctggtgcagcatttcacccgctacgtc
gactacgacttcaccgccaagctcgaggacgagctcgatgcggtgagtcgcggcgaggaa
gcctgggtgccgctgatggagcggttctggcagccgttcaagcagcaggtggacgaaaag
accgagtcggtcgaccgcagcgaggcgaccggcgcgcgcgagctgggtaccgacccgaag
tccggcaagccggtctcggtgcggctgggtcgctatgggccgtacgcgcagatcggcgac
aaggacaccgacgagaagctgcagttcgccagcctgcgtcccggccagagcatgcacacc
atcaccctggagcaggcgctggagctgttcaagctgccgcgcaagctgggtcaggcggag
aacggcgacgaggtcagcgtgggcatcggccgcttcgggccgttcgtgaagcagggctcg
acctacgcctcactcaagcccgaggacgacccgtacaccatcgagctgccgcgtgcgctg
cagatcgtcgccgagaagctggagatgctcgccaaccgggtcatccaggatttcggcaac
ggcgtgcaggtgctcaacggccgctacggcgcctacatcaccgatggcgagaagaacgcc
cgcatccccaaggacaccgagccgaaggacctgaccgaggcacagtgcctggagctgctg
gcggctgcgccggtgaagaagggtcgcttcgccaagaagacggcggcgaagaagaccgcc
gagaagaaggcgccggccgcgaagaaggccacgaccaagaaagctcccgcgaagaaagcc
gccgccaagaagaccgcggcgaaaaagaccgccaccaggaaagcggccgcgaagaagacc
gccgccaagtcgagcggggactga
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