Dyella thiooxydans: ATSB10_33670
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Entry
ATSB10_33670 CDS
T04308
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dtx
Dyella thiooxydans
Pathway
dtx03030
DNA replication
dtx03410
Base excision repair
dtx03420
Nucleotide excision repair
dtx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATSB10_33670
03410 Base excision repair
ATSB10_33670
03420 Nucleotide excision repair
ATSB10_33670
03440 Homologous recombination
ATSB10_33670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dtx03032
]
ATSB10_33670
03400 DNA repair and recombination proteins [BR:
dtx03400
]
ATSB10_33670
Enzymes [BR:
dtx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATSB10_33670
DNA replication proteins [BR:
dtx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ATSB10_33670
DNA repair and recombination proteins [BR:
dtx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ATSB10_33670
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATSB10_33670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AND70821
UniProt:
A0A160N472
LinkDB
All DBs
Position
complement(3655011..3657758)
Genome browser
AA seq
915 aa
AA seq
DB search
MAKLILIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKANPDYLAFVSDAPG
KTFRDDMYDQYKANRPPMPDDLRAQVEPMLAIVEALGFPILRVPGVEADDVIGTLARQAE
AAGIEVEVSTSDKDMAQLVSPHITLVNTMTGTVMNADAVKDKFGVPPERIIDFLALTGDT
VDNVPGVPKCGPKTAAKWLAEYDSLDGVIAHAGEVGGKIGESLRAALPQLPLSRDLVTIK
TDVALEQGPTDLARREADVATLRELYTRYEFKQALKELDSADAPVGAHPVRDALAPDAAE
DDRAQGALLPADNAPGSYELVTTPAQLDAWLAKLEKAELIAFDTETTSLDAMQAEIVGAS
FAVETGHACYIPLAHDYPGAPAQLDRAATLAALKPLLENPARPKLGQHAKYDINVLSQYG
ITVQGLKHDTLLESFVWNATATRHDMDSLASKYLGYETIKYEQVAGKGAKQISFSQVDLE
TARDYAAEDADVTLRLHRALWPKLESEPKLRQVYETIEMPLVPVLARMEQRGVLIDVNEL
RKQSQQLGKRMHEIQQQAYAEAGRDFNLDSPKQLQAILFDELGLAARVKTPKGQPSTNEE
ALEAIADDHPLPRLILDYRGLAKLRSTYTDKLSGMVNPRTGRVHTSYHQGGAATGRISSS
DPNLQNIPVRTEEGRRIRQAFIAPEGWRVMAADYSQIELRIMAHLSGDEGLLKAFHEGGD
VHRATAAEVFGLPPEEVSANQRRAAKAINFGLMYGMSAFGLAKQLGVDRGEAGDYMARYF
ARYPGVHAFMETTRAQAHRDGYVQTIFGRRLYLENLSARNQALRQGAERAAVNAPMQGSA
ADIIKRAMIAVDGWLAGRDDARMLMQVHDELVFEVRADAVDAVREGVVARMSGAAELKVP
LLVDVGVGANWDEAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggccaagctcatcctgatcgacggttcctcctatctctaccgcgccttccacgcactg
ccgccgctgaccaacgcccagggcgagccgaccggcgcgctgttcggcgtggtcaacatg
ctgcgcgccacgctgaaggcgaatccggactacctcgccttcgtcagcgatgcgcccggc
aagactttccgcgacgacatgtacgaccagtacaaggcgaaccgaccgccgatgccggac
gacctgcgcgcgcaggtcgagccgatgctggcgatcgtcgaggcgctgggcttcccgatc
ctgcgtgtgcccggagtggaagccgacgacgtgatcggcacgctggcgcggcaggccgag
gcggccggcatcgaggtggaggtctccaccagcgacaaggacatggcgcagctggtcagc
ccgcacatcaccctggtcaacaccatgaccggcacggtgatgaatgccgacgccgtcaag
gacaagttcggcgtgccgcccgagcgcatcatcgacttcctcgcgctcaccggcgacacc
gtcgacaacgtccccggcgtgcccaagtgcggcccgaagaccgccgccaagtggctggcc
gaatacgactcgctggacggcgtgatcgcgcacgccggcgaggtcggcggcaagatcggc
gagagcctgcgcgccgcgctgccgcagctgccgctgtcgcgcgacctggtcaccatcaag
accgacgtcgcgctcgaacaggggccgaccgacctggcccgccgcgaggccgacgtggcg
acgctgcgcgagctctacacccgctacgagttcaagcaggcgctgaaggaactggacagc
gccgacgccccggtaggagcgcaccccgtgcgcgatgctcttgctcctgatgcggccgaa
gacgatcgcgcacagggtgcgctcctacccgcagacaacgcgccgggcagctacgaactg
gtcaccaccccggcccagctcgacgcctggctggcgaagctggagaaagccgagctgatc
gccttcgacaccgagaccaccagcttggacgcgatgcaggcagagatcgtcggcgcctcg
ttcgcggtcgagaccggccacgcctgctacatcccgctggcgcacgactaccccggcgcg
cccgcgcagctggaccgtgccgccacgctggccgcgctgaagccgctcctggagaacccc
gcgcgacccaagctcggccagcacgccaagtacgacatcaacgtgctcagccagtacggc
atcaccgtgcaggggttgaagcacgacaccctgctcgagtccttcgtgtggaacgccacc
gccacgcggcacgacatggattcgctggcgagcaagtacctcggctacgagacgatcaag
tacgagcaggtggccggcaagggtgccaaacagatttccttttcccaggtcgatctggag
accgcgcgcgactacgccgccgaggacgccgacgtcaccctgcgtctgcaccgtgcgcta
tggccgaagctggaaagcgaaccgaagctgcgccaggtctacgagaccatcgagatgccg
ctggtgccggtgctggcgcggatggaacagcgcggcgtattgatcgacgtgaacgaactg
cgcaagcagagccagcagctcggcaagcgcatgcacgagatccagcagcaggcgtatgcc
gaagccggccgcgacttcaacctcgattcgcccaagcagctgcaggcgatcctgttcgat
gagctcggcctggcggccagggtgaagacgcccaagggccagccctcgaccaacgaagag
gcactggaagcgatcgccgacgaccacccgctgccgcggctgatcctcgactaccgcggc
ctggccaagctgcgctcgacctataccgacaagctttccggcatggtcaatccgcgcacc
ggtcgcgtgcacaccagctaccaccagggcggcgcggcgaccggtcggatctcatcctcc
gatccgaacctgcagaacatcccggtgcgcaccgaggagggccggcgcatccgccaggct
ttcatcgctcccgaaggctggcgggtgatggcggcggactattcgcagatcgagctgcgc
atcatggcccacctgtccggcgacgaaggcctgctcaaggccttccacgagggcggcgac
gtgcaccgggccaccgcggcggaggtgtttggcctgccaccggaggaggtcagcgccaac
cagcgtcgcgccgccaaggcgatcaacttcggcctgatgtacggcatgagtgccttcggc
ctggccaaacagctcggtgtggaccgcggcgaggccggcgactacatggcgcgctacttc
gcccgctaccccggcgtgcacgccttcatggagaccacccgcgcgcaggcgcaccgcgac
ggctacgtgcagaccatcttcggccgccggctgtacctggagaacctcagcgcccgcaac
caggcgttgcgacagggcgccgagcgcgccgcggtgaacgcgccgatgcagggcagcgcg
gcggacatcatcaagcgggcgatgatcgccgtggatggctggctcgccggccgcgacgac
gcccgcatgctgatgcaggtgcacgatgaactggtgttcgaagtgcgcgccgacgcggtc
gacgcggtgcgtgagggcgtggtcgcgcggatgagcggcgcggccgaactgaaggtgccg
ctgctggtcgacgtgggcgttggcgccaactgggacgaggcgcactga
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