Dyella thiooxydans: ATSB10_38350
Help
Entry
ATSB10_38350 CDS
T04308
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
dtx
Dyella thiooxydans
Pathway
dtx00550
Peptidoglycan biosynthesis
dtx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ATSB10_38350
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dtx01003
]
ATSB10_38350
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dtx01011
]
ATSB10_38350
Enzymes [BR:
dtx01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
ATSB10_38350
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ATSB10_38350
Glycosyltransferases [BR:
dtx01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
ATSB10_38350
Peptidoglycan biosynthesis and degradation proteins [BR:
dtx01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
ATSB10_38350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
PBP1c_linker_2
Motif
Other DBs
NCBI-ProteinID:
AND71289
UniProt:
A0A161IW96
LinkDB
All DBs
Position
4198627..4200957
Genome browser
AA seq
776 aa
AA seq
DB search
MAFVTRLQSFVRTAWPWVRIPFWIGVGLFFGFLLPYTLVLNKRVQDRFNDLVFAVPTRVF
ARPLQLEAGEPMTPAALELELTFAGYSEDGKGELPGRWGKHGGRYTISSRGYAGPDGGEL
PKRIVVTMGRGVVASVVDAGSGKPLKEAHLDPARIATVYGAQQEERRIVHLADVPPLLVS
GLQAVEDRDFKHHIGIDFTAILRAAFANLRAGHTVQGGSTLTQQLVRNLFLDRNQNFTRK
FNEAILSLLIEAHYPKSRILEAYINEVFLGQQGSQAVHGFAAAAEFYFGRRLEELRPQEI
ALLVGMVKGPSYYDPRRYPEHALARRNLVLEQFAKTGLMTAAQAKAAEATPLGIADNAQL
PHNRFPAFMDLVRRQIRADFDDDTLRAGNLSIFTTLDPAAQLYAEKAVTEAVKSLGKRGN
AIQAAGVVTDAHTGSVLAVIGSKTPGDPGFNRAMDAQRPVGSTIKPFVYLVALTDPAHWN
LGTLLDDSPVSMRQPDGSMWEPHNDDNQSHGMLPMVDALAHSWNLATIHLGLEVGLPRIQ
AFLESFGFKGINPSPSLLIGAQDMAPLQLAQLYEYLASDGHALPLLAVRGVVDGNGRTIK
RYEVQEGPGEYQPAVRLITWAMQQVAVFGTAHSIGDSGLAWLNAAGKTGTSNDTRDSWFA
GFTGDRLAVFWMGRDDNKPTGLFGATGGLRIWRNLFARLPTRPLSAEPGPGLEMAWINPA
DGKRTDPQCSGARQLPVVAGSLPPEVDSCFWQRVGNFFGVGDNNNPPSQPAPAPSH
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttggcctttgtgacccgactgcaatccttcgtccgcaccgcctggccgtgggtgcgcatt
ccgttctggatcggggtgggcctgttcttcggcttcctgttgccttacacactggtgctc
aacaagcgcgtgcaggaccgcttcaacgacctggtgttcgcggtacccacgcgggtcttc
gcgcgcccgctgcaactcgaggccggcgagccgatgacgccggcggcgctggagctggag
ctgaccttcgccggctacagcgaggacggcaagggcgagttgcccggacgctggggcaaa
catggcggacgctatacgatctcctcgcgcggctacgccggcccggacggcggcgagctg
cccaagcgcatcgtggtcacgatggggcggggcgtggtcgcgtcggtggtcgacgcgggc
agcggcaagccgctgaaggaagcgcatctcgacccggcacgcatcgcgaccgtgtatggc
gcgcagcaggaagagcgccgcatcgtgcacctggccgacgtaccgccattgctggtgagc
gggctgcaggcggtcgaggaccgcgacttcaagcaccacatcggcatcgacttcaccgcg
atcctgcgtgcggcgttcgccaacctgcgcgccggtcacacggtgcagggcggttcgacg
ctgacccagcagctggtgcgcaacctgttcctggaccggaaccagaacttcacccgcaag
ttcaacgaggcgatcctgtcgctgctgatcgaggcgcactatccgaagtcgcgcatcctc
gaggcgtacatcaacgaggtgttcctcggccagcagggcagccaggcggtgcatggcttt
gccgcagcggcggagttctacttcggccgccggctggaagagctgcgaccgcaggagatc
gccttgctggtcggcatggtcaagggcccgagctactatgatccgcggcgctatcccgag
cacgcgctggcgcgacgcaacctggtgctcgagcagttcgccaagaccggcctgatgacc
gcggcgcaggccaaggcggccgaagccacgccgctgggcatcgccgacaacgcgcagctg
ccgcacaaccgcttcccggccttcatggacctggtgcgacggcagatccgcgccgacttc
gacgacgacaccctgcgtgcgggcaacctgtcgatcttcaccacgctcgatccggccgcg
cagctgtatgccgaaaaggcggtcaccgaggcggtgaagtcgctgggcaagcggggcaac
gcgatccaggccgccggcgtggtgaccgacgcgcataccggcagcgtgctggcggtgatt
ggcagcaagacccccggcgaccccggcttcaaccgtgcgatggacgcgcagcgcccggtc
ggctcgaccatcaagccatttgtctacctggtcgcgctgaccgatccggcgcactggaac
ctcggtacgctgctggacgacagcccggtcagcatgcgccagccggacggctcgatgtgg
gagccgcacaacgacgacaaccagagccacggcatgctgccgatggtcgatgcgctggcg
cattcgtggaacctggcgacgatccatctgggactcgaggtcggcctgccgcggatccag
gcgttcctggagtcgttcggtttcaagggcatcaatcccagtccctcgctgctgatcggc
gcacaggacatggcgccactgcagctggcgcagctctacgaatacctcgcctccgatggc
cacgccctgccgctgctcgccgtgcgtggcgtggtcgacggcaacggccgcaccatcaag
cgctacgaggtgcaggaaggtcccggcgagtaccagccggcggtgcgcctgatcacctgg
gcgatgcagcaggtagcggtgttcggcacggcgcattcgatcggcgactccgggctggcc
tggctgaatgcggccggcaagaccggtaccagcaacgacacgcgcgacagctggttcgcc
ggcttcaccggcgaccgtctggcggtgttctggatgggccgcgacgacaacaagccgacc
gggctgttcggcgccaccggcggtctgcgcatctggcgcaacctgttcgcacggctgccg
acccgtccgctgtcggctgagcccggccccggcctggagatggcctggatcaaccccgcc
gacggcaagcgcaccgatccgcaatgcagcggcgcgcgccagctgccggtggtcgccggc
agcctgccgccagaggtcgacagctgcttctggcagcgtgtcggcaacttcttcggcgtc
ggcgacaacaacaatccgccgtcgcaacccgcgccagcacccagccactaa
DBGET
integrated database retrieval system
