Dehalococcoides sp. UCH007: UCH007_00540
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Entry
UCH007_00540 CDS
T03880
Symbol
radA
Name
(GenBank) putative DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
duc
Dehalococcoides sp. UCH007
Brite
KEGG Orthology (KO) [BR:
duc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
duc03400
]
UCH007_00540 (radA)
DNA repair and recombination proteins [BR:
duc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
UCH007_00540 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_16
AAA
AAA_22
ABC_tran
NTPase_1
AAA_30
RecA
nSTAND3
NACHT
DAP3
Rad51
Isochorismatase
KdpD
AAA_5
AAA_14
NPHP3_N
SLFN-g3_helicase
zf-RING_10
TackOD1
AAA_19
DUF815
ATPase_2
GvpD_P-loop
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
BAQ34012
UniProt:
A0A0C6EMF5
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All DBs
Position
53407..54795
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AA seq
462 aa
AA seq
DB search
MEKSRRVYVCSNCGRESLKWLGRCPGCQEWNTLEETTVVSPVGRKNEPARVISPAAELSS
LQAAETTRRSLSISEFNRVLGGGIVPGSLMLLGGEPGIGKSTLLLQVAASVAQSGGKVVY
VSGEENPAQIKMRAQRLGISGEGLFLMAETDLNAILAQLSVLSPSLVVIDSIQTVFLPEL
EAAPGAINQVRESALRLMQWAKSSGASVFITAHVTKEGNIAGPRILEHIVDVVMYFEGES
QSAYRLVRSVKNRFGSTNEVGIFEMKSEGLVEVANPSQIFLSNRQTNTVGSAVTAVLEGS
RPLLVEVQALTNTTSFGQPRRTANGVDFNRTLMIAAVLSKRLSMRLGTQDIIVNATGGIR
LDEPAADLAIALAIASSYRDIGVCPETIALGEIGLSGEMRTISHLERRLSEASRLGFKRA
LVPAGANCHNVHNIQIIPVSTVKEAVRLALTGVKTETEDVFE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagccgtagagtttatgtttgttccaactgcgggcgtgagagcctgaagtgg
ctggggcgctgtcccggctgtcaggaatggaatacccttgaagaaacaacggttgtttca
cctgtaggacgtaaaaatgaacctgcccgtgttatcagcccggcggctgagctttccagt
ctgcaggcagccgaaaccacccggcggagtttatctatttcggagttcaaccgggtatta
ggcggcggcatagtgccgggttcgcttatgcttttgggtggtgagccgggaatcggcaaa
tccactcttcttcttcaggtggcggcttcggtagcacaaagcggcggtaaggtagtatat
gtttcaggggaagaaaaccccgctcagataaaaatgcgcgcccaacgtcttggtatcagc
ggcgaagggcttttccttatggctgagaccgaccttaatgccattctggctcagctttca
gtcctcagcccgtcattggtcgttattgactctatccaaactgtattcctgccggagctt
gaggccgcacccggtgctataaatcaggtgcgtgaatcagccctccgccttatgcagtgg
gctaaaagcagcggtgccagtgtatttataacagcccatgttactaaagaaggcaatata
gccgggccgcgcatattggaacacatagtagatgtagtcatgtactttgagggagagtcc
cagagtgcttaccgtttagtgcgttctgtcaaaaaccgcttcggttccactaacgaagtg
ggtatatttgaaatgaaaagtgaaggtctggtagaagtagctaacccttcccagatattt
ttatcaaatcgccagacaaacacggtaggctcggctgtaaccgctgtactggagggcagc
cgtcctttgctggttgaggtgcaggcacttaccaataccaccagtttcggccagccgcgc
cgcactgccaacggggtggattttaaccgcacccttatgatagctgcggtcctctccaaa
cgcctgtccatgcgtttaggtacgcaggacattattgtaaacgccaccggcggtatccgt
ttggatgagccggctgcagatttggctattgcactggctattgcttccagttaccgggat
atcggcgtatgccccgaaactatcgctctgggagagattggtctttctggggaaatgcgg
actatttcccatctggaaaggcgtctttccgaggccagccgtttgggttttaaaagggct
ttggtaccggccggtgctaactgccacaatgtacataatatccagataattccggtttca
actgtcaaagaggcagtgaggctggcacttaccggggtgaaaacggagacggaagatgtt
tttgaatga
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