Dehalococcoides sp. UCH007: UCH007_01050
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Entry
UCH007_01050 CDS
T03880
Symbol
pycB
Name
(GenBank) pyruvate carboxylase subunit B
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
duc
Dehalococcoides sp. UCH007
Pathway
duc00020
Citrate cycle (TCA cycle)
duc00620
Pyruvate metabolism
duc00720
Other carbon fixation pathways
duc01100
Metabolic pathways
duc01120
Microbial metabolism in diverse environments
duc01200
Carbon metabolism
duc01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
duc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
UCH007_01050 (pycB)
00620 Pyruvate metabolism
UCH007_01050 (pycB)
09102 Energy metabolism
00720 Other carbon fixation pathways
UCH007_01050 (pycB)
Enzymes [BR:
duc01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
UCH007_01050 (pycB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
HMGL-like
Biotin_lipoyl
Biotin_lipoyl_2
HlyD_3
RnfC_N
HlyD_D23
NQRA_N
GCV_H
DUF2118
DUF561
ATP-synt_ab_Xtn
PYNP_C
Motif
Other DBs
NCBI-ProteinID:
BAQ34063
UniProt:
A0A0C6ETJ1
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All DBs
Position
104050..105813
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AA seq
587 aa
AA seq
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MGIKITDTTLRDAHQSLIATRMRTRDMIDIAAKLDKVGFYSLEVWGGATFDSCIRFLNED
PWERLRLIRQKASNTPLQMLLRGQNLVGYRHYADDVVREFVRLSVKNGIDIFRVFDALND
TRNMEVSIQTAKELKAHVQGTICYTTSPIHTVEKLAEMAVELEKMGCDSICIKDMAGLIT
PTAAAQLVKSIKAKVKLPVDLHSHCTSGMAPLAYYAAAEAGVDIIDTAFSAFAWGTSQPT
TESFVAAFQGTKLDTGLNLELMSEIGEEFNKISSTYRCLYTCEATQPSIGVLLHQIPGGM
ISNLVSQLRQQNAFDKLPQVLAEVPKVRADLGYPPLVTPSSQIVGTQAILNVLSGARYKQ
VTKETKNYLMGYYGKIPGAVNEEIRKAIIGDEKPVSVRPGALLEPELPKMKAEGEKLGIL
KTEEDLLTYAMYPEVAAKFLKGECKEECLLPSTPETDKAAKAEAKTEAKSAPVFNGSAEY
SVEVDGEVFTVKVSSKAGIVGEAPKAAKPTASHPGAVVSPMQGMLLSLKVKEGDKVTEGE
VVATIEAMKMENDVTAAVSGVVSEIYAYEGEVVGSKDVIMVIEPDAK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgggtataaagataacagatacaactctgcgggatgcgcaccagtcactgatagccacc
cgaatgcgtacccgtgacatgattgatattgccgccaaactggataaggttggcttttat
tcactggaagtctggggcggtgctacatttgactcctgtatccgttttctgaatgaagac
ccctgggaacgtctccgactgatacgccagaaagcgtccaatacccctcttcagatgctt
ctccgcgggcagaatctggtgggataccgccactatgcagatgatgtggtgcgtgagttt
gtccgtttgtccgttaaaaacggcatagatattttccgggtttttgatgccttgaatgat
acccgaaatatggaagtttccatccagacggccaaagagcttaaggcccatgttcagggt
actatctgttataccaccagtcccattcataccgtagagaagctggccgagatggcagtg
gaactggaaaaaatgggctgtgattccatatgtatcaaagacatggccgggcttatcact
cctaccgctgccgcccagctggtcaagtctataaaagccaaggtcaaactgccggtggac
ctccactcacactgcaccagcggcatggcgcctttggcttattatgctgcggccgaggcc
ggggtggatataatagataccgccttttccgcctttgcctggggtacttcccagcccacc
accgaaagtttcgtggccgcttttcagggtacgaaactggataccgggcttaatctggaa
cttatgagcgaaataggtgaggaatttaataaaataagttctacttaccgctgcctttat
acctgtgaagccacccagccgagtatcggcgtgcttctccaccagatacccggcggtatg
atttcaaacctggtcagccagcttcgccagcagaatgcctttgacaaactgccacaggta
ttggccgaagtacccaaagtaagggcggatttgggctaccccccgctggttaccccgtca
agccagattgtaggtacgcaggccattttgaacgtgctgagcggcgcccgctacaaacag
gtaaccaaagaaactaaaaactatctcatggggtactacggtaaaatacccggtgcggta
aatgaagaaatacgcaaagctattatcggtgatgaaaaacccgtcagtgtcaggccgggg
gctttacttgagccggaactgcccaagatgaaagccgaaggcgaaaagttgggtatactt
aaaaccgaggaagaccttttgacttatgccatgtaccctgaggtagcggccaaattcctc
aagggtgagtgcaaggaagagtgccttttgccgtccacccctgaaacagacaaagctgcc
aaggctgaagccaaaaccgaagctaaatccgctccggtctttaatggttcggctgaatac
agcgttgaggtagacggagaagtctttacggttaaggtttcttccaaggccggtatagtt
ggtgaagcccccaaggctgctaaacctactgcctcgcatccaggtgcggttgtttctccc
atgcagggtatgcttctttcactgaaggtgaaggaaggggataaggtaaccgagggtgaa
gtagtggctaccatagaagctatgaaaatggaaaatgatgtcactgccgctgtaagcggg
gtggtttcggaaatatatgcctacgaaggcgaagtggtaggcagtaaagacgttatcatg
gtgattgagccagatgctaaataa
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