Dehalococcoides sp. UCH007: UCH007_03170
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Entry
UCH007_03170 CDS
T03880
Symbol
pdxS
Name
(GenBank) pyridoxal biosynthesis lyase PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
duc
Dehalococcoides sp. UCH007
Pathway
duc00750
Vitamin B6 metabolism
duc01100
Metabolic pathways
duc01240
Biosynthesis of cofactors
Module
duc_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
duc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
UCH007_03170 (pdxS)
Enzymes [BR:
duc01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
UCH007_03170 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NMO
NanE
DUF561
IGPS
His_biosynth
FMN_dh
Ribosomal_S5_C
TetR_C_27
TIM
Motif
Other DBs
NCBI-ProteinID:
BAQ34275
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Position
complement(305538..306419)
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AA seq
293 aa
AA seq
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METGTFKVKSGLAQMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPSDIRAAGGVARM
ADPTIIEQIMKVVSIPVMAKCRIGHFVEAQILESMGVDYIDESEVLTPADENFHVWKHDF
KVPFVCGCRDLGEALRRIGEGAAMIRTKGEAGTGNIVEAVRHMRSVMGSVRRVQSMSADE
LSAYAKEINAPLELVIELHKTGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKS
SNPAAMAKAVVKAVTHYKDAKVLAEISKGLGDAMPGLDIKQIEPDKLISQRGW
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccggtacttttaaagtaaaatctggcctggcccaaatgctaaaaggcggggtg
attatggatgtaaccacccccgaacaggctaaaatagcggaagaagcaggcgcctgcgcc
gttatggctttagagcgcgtaccttcggatataagggcggccggcggcgttgcccgcatg
gcagaccccactattatcgagcagattatgaaagtagtcagcatacctgttatggccaaa
tgccgtattggtcatttcgtagaagcccagatactggaatccatgggggttgactacatt
gatgagtccgaggtacttaccccggctgatgaaaatttccacgtctggaaacatgatttt
aaagtccccttcgtttgcggctgccgtgatttgggcgaggccttaaggcggattggcgaa
ggcgcagctatgatacgcaccaagggtgaggccggcaccggcaacattgtggaagcagtg
cgccacatgcgttccgttatgggctctgtcaggcgtgtacaatccatgtctgctgacgaa
ctttccgcctatgctaaagagataaatgcacccctggaactggtgattgaacttcacaaa
acaggtaaactgccggtagtaaactttgccgccggcggagtagctaccccggctgatgca
gcccttatgatgcagctgggggcggacggggtatttgtaggttcgggtatattcaaatca
tcaaaccccgcagctatggccaaagccgtagtaaaggcagtaacccactataaagatgcc
aaagtactggccgaaatatccaaagggctgggtgatgccatgcctggtctggatataaaa
cagatagaacccgacaagctgatttcccaaaggggctggtaa
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