Dehalococcoides sp. UCH007: UCH007_04770
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Entry
UCH007_04770 CDS
T03880
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
duc
Dehalococcoides sp. UCH007
Brite
KEGG Orthology (KO) [BR:
duc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
duc03400
]
UCH007_04770 (sbcC)
DNA repair and recombination proteins [BR:
duc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UCH007_04770 (sbcC)
Archaeal homologous recombinant proteins
UCH007_04770 (sbcC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_29
SbcC_Walker_B
AAA_21
Rad50_zn_hook
TPR_MLP1_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BAQ34435
UniProt:
A0A0C6EI03
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Position
complement(445927..448506)
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AA seq
859 aa
AA seq
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MIPVKLRIKNFMCYRGEIPPFSFNGVHTACICGQNGAGKSALIDAITWALWGKSRAKSDD
DVVSLNEQETEVSLDFEISGELYQVIRQRQRPKKTGANGQSLLSLFAIKDGKPLNITGDT
LTQTEKKIISILHMDYDTFINSAFLRQGHANQFTQQPPGKRKEVLSNILGLEIYDQLEDL
ARQAVREAEAKKLLIEQSIADGQEGLKSRPELEEALKNTRLSLTDGEEKLKTHIAKLEIL
RHKKHAFDAKQSACLQIEKDLRDISKDQSLWAQNQQDIKQRISMFESLSARKDEILKGFQ
EYTACQSLYEKHNRVLAKLRQLESSKKPFEDAVYKEENSLKNTLTKYQEHLKMRQETAQT
LSRLEQEKKQSDLMHLELENEETVLKIKQTKLAEMQGSLAGLETEYAGTAREISSLEEKL
KLLIEASESRCNCPLCETELGQDKLKLVFGKYRTEQDANGKQQSSLKLKLEQLRLDIQTL
TAQIETETKRLNQKRRQYEGQLSVLEKGIADAKDAGTKAAKGRELISDIEKQLNERSYAV
SEQARLAVIEKEILELNFDNAEYTQNQQTLAGLTHFEEQKRKLDEAQSRLPIERDSLEKT
TSALAELTARHDTKLSEQQTLQRELTELPALEQELETAEAGYKLLSQTQDTLRQQLGSLN
QKEEQLNELEKKLKKQEQDKEQTAKEIYYFGKLARAFGKKDGIQTMLIEDTLPELESGAD
LLLSRMTDGRMHLSIETQRSTKKGDQTETLDINISDELGTRNYETFSGGEAFRIDFAVRI
ALSRLLANRLGAPLRTLIIDEGFGTQDSTGIERLKEAINSIQDEFDKILVITHIDDLKDS
FPTRIEIDKTPSGSAIRLN
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtcaaactcagaataaaaaactttatgtgctaccgcggcgaaattccgcct
ttttcttttaacggggtgcataccgcctgcatctgcggccagaacggggccggcaaatct
gctttgatagacgccattacctgggcactctggggaaaaagccgggctaaaagtgatgat
gatgtagtgtctctaaacgaacaggaaactgaagtcagcctagattttgagatttcgggt
gaactttatcaggttatccgccaacgccaacgccccaaaaagaccggagcaaacgggcaa
agccttttaagcttgtttgccataaaggatgggaaacccctgaatatcaccggggatacc
ctgacccaaacagagaaaaagataatttccatactgcatatggactatgacacctttata
aacagtgcttttctgcggcaagggcatgccaaccagtttacccagcagccccccggcaaa
cgcaaggaagtactctctaatatactggggttagaaatatatgaccagctggaagacctg
gccagacaggccgtacgcgaggcagaggctaaaaaactgcttatagagcagagtattgca
gacggccaagaagggctgaaatccagaccggaactggaagaagctttaaaaaatacccgc
ctgagcctgacagacggtgaggagaaactgaaaacccatattgccaagctggaaatcctc
aggcataaaaaacatgcctttgatgccaaacaaagtgcctgcctccagatagaaaaagac
ctgcgggacatatcaaaagaccagtcactttgggcacaaaatcaacaggatataaaacag
cgtatcagcatgtttgaatcactctctgcccgaaaggatgaaatccttaaaggttttcag
gaatacaccgcctgccaaagtctgtatgaaaaacacaatcgcgtactggcgaaactaaga
cagttggaaagttccaaaaaaccctttgaagatgccgtctataaagaggaaaacagcctg
aaaaacaccctgactaaatatcaggaacatctcaaaatgcggcaggaaaccgcccaaacc
ctgagcaggctggaacaagaaaaaaaacagtcagacctgatgcacctggaactggaaaat
gaagagactgtcttaaaaatcaagcaaaccaagctggcagagatgcaaggaagtttagcc
ggactagagaccgagtatgccggtacggccagagaaataagctctctggaagaaaaacta
aaactgcttatcgaagcaagtgaaagccgctgcaactgccccctgtgcgaaaccgagctg
gggcaagacaaactcaaattggtattcggcaaatatcggacagaacaagatgctaatgga
aaacagcaaagcagcctgaaactaaagcttgagcagctaaggctggatatccagacttta
actgcccaaattgaaactgaaaccaaacgcttaaaccaaaaacgcaggcagtatgaggga
cagctgagcgtactggaaaaagggattgcagacgccaaagatgccggaaccaaagcggca
aaaggcagagagctgatttcggatattgagaagcagctgaacgaacgcagttatgccgtt
tccgagcaagccaggctggcagtaattgaaaaagagatactggaactgaattttgataat
gccgaatacacccaaaaccagcaaactttggccggcctgacccactttgaggaacaaaaa
cgcaaactggacgaggcacaaagccgcctgccgatagaaagagatagcttggaaaaaacg
acttcggcactggcagaactcaccgcccgccatgatactaaactgagtgaacagcaaacc
ctgcaaagagaactgactgaactgcccgcactggagcaggagctggaaaccgccgaagcc
ggatacaagttactcagccaaacacaggataccttgaggcaacaactgggttcgctcaac
cagaaagaagagcagttgaatgaactggaaaaaaagctgaaaaaacaggagcaggataaa
gagcaaaccgccaaagaaatatactactttggtaaactggccagagctttcggcaagaaa
gacggaatccagaccatgctgattgaagacaccctgccggaactggaaagcggggcagac
ctgctgctgtcacggatgactgacgggcgtatgcaccttagtatagaaacccagcgctca
accaaaaagggagaccagaccgagacgctggatataaatatctcggatgagctgggcacc
cgcaactacgaaacattcagcgggggtgaggctttcaggatagattttgcggtcaggatt
gccctgtcacgcctgctggcaaaccgtctgggcgcacctttgcggacgctgattattgat
gaagggttcggcacacaggactcaaccggtattgaacgcctgaaagaggctataaactcc
attcaggatgagtttgacaagatactggtcataacccatatagatgacctgaaagattct
ttccccacccgcattgagatagataaaaccccgtcaggctcagctatacgcttaaactaa
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