Dehalococcoides sp. UCH007: UCH007_09460
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Entry
UCH007_09460 CDS
T03880
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
duc
Dehalococcoides sp. UCH007
Pathway
duc03420
Nucleotide excision repair
duc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
duc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UCH007_09460 (pcrA)
03430 Mismatch repair
UCH007_09460 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
duc03400
]
UCH007_09460 (pcrA)
Enzymes [BR:
duc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UCH007_09460 (pcrA)
DNA repair and recombination proteins [BR:
duc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UCH007_09460 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
UCH007_09460 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
CarD_TRCF_RID
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAQ34904
UniProt:
A0A0C6E2I2
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All DBs
Position
complement(922976..925192)
Genome browser
AA seq
738 aa
AA seq
DB search
MQDILTGLNPAQKQAVEAVEGPVLILAGPGSGKTRVITHRIAYLIKVVGINPHRIMAVTF
TNKAAREMETRLNLLAPSAAGRLTMGTFHAICARILRQDGLPLGVPADFVIYDDDDQQSL
IKQAMAELELDPKRYPPASIRNAISQAKSQLVLPAYYFEKGRSYFEEVVGRVYELYEKRL
KQNKALDFDDLLLKVVQLFKQHPEVLARYQERYLHVMVDEFQDTNLVQYELVKMLSAKYK
NICVVGDPDQSIYSWRSADLRNVFNFETDNPGAKVILLEQNYRSTKNILEAASCVIAPNS
GRKPISLWTENESGQPIAVVETFNEQEEAQFVVSEIEKLTRYEKFSPGDIAILYRTNAQS
RALEEAFIRYGMPYRLVSGTRFYQRREVKDIVAYLRLLQNPQDSVSLQRVINIPTRGIGA
KTLSDLGQFAREQDISLYESLINLSDENAPKPPIPSRGLKPLTDFGLLLKSLVADARNLP
LLNLLDRLLEGINYREFLFASEDGEERWDNILELRTVAQQYQEISPPEGLSAFLESVALV
SDLDSLEEGVSAVTLITLHQAKGLEYPVVFMVGMEEGVLPHSRSFDDPAQMQEERRLCYV
GVTRARKRLYLVRAFRRSLMGQSNVNEPSRYLKDIPQGITKGREKQPLSGQHTAASAASP
VIKQHLQSAGMPIKSAAAPAPKLLELEAGDKVLHPQFGEGIVTSINRVKNDAEVMISFHS
VGMKRLMLSFARLTKLEN
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacatacttacagggctgaaccccgctcaaaaacaggccgttgaagccgtggaa
gggccggtgcttatactggccggtccgggcagcggtaaaaccagggttattacccaccgg
attgcctacctgattaaagtagtaggtataaacccccaccgcattatggctgttaccttt
accaacaaggccgcccgtgaaatggagacccgcttaaacctgctggctccctcagcggcg
ggacgtctgactatgggcacttttcacgctatctgcgcccgcatactcaggcaggacggt
ctgcctttaggtgtaccggctgactttgtaatatacgatgatgatgaccagcaaagcctt
atcaagcaggctatggccgagctggagctggaccccaagcgttatccgcccgcttccatc
agaaatgccatcagccaggccaaaagccagctggtgcttccggcatattactttgaaaaa
ggccggagctattttgaagaggtggtaggtagggtttatgaactctacgaaaaacgcctt
aagcagaacaaggcactggattttgatgacctgctgctgaaggttgttcagctgtttaag
cagcaccctgaggtgctggccaggtatcaggaacgttatctgcatgtaatggtagatgag
tttcaggataccaatctggttcagtatgagctggtaaagatgctgtctgccaagtacaaa
aatatctgtgtggtgggtgaccctgaccagtccatttattcgtggcgttcggcagacctg
agaaatgtctttaattttgaaacagataatccgggtgccaaagtgattttgctggagcag
aattaccgctctaccaaaaatattctggaagcggcttcgtgtgtaattgccccgaacagc
gggcgtaaacctatcagtttgtggactgaaaatgaatccggccagcctatagcagtagtt
gaaacctttaacgagcaggaagaagcccagtttgtggtttctgaaattgaaaaactgacc
cggtatgaaaagttcagccccggtgatatagctattctttaccgtaccaatgcccagtca
cgggctttggaagaggcatttatccgctacggcatgccttaccgtctggtttccggcacc
cgcttttaccagcggcgtgaggttaaagatattgtggcttatctgcgtttgctgcaaaat
cctcaggacagcgtcagcctccagagggttataaatatacccacccgcggaataggggct
aaaaccctttctgatttgggccagtttgccagagaacaggatatcagcctgtatgagtca
cttataaatttatcagatgaaaatgcccccaaaccgcccatacccagccggggcttaaaa
cccctgactgacttcggtcttttactgaagtcactggtggcggatgcccgtaatttgccc
cttttaaacctgctggacaggctgcttgagggtataaattaccgtgaattcctgtttgcc
tccgaagacggggaggagcgctgggataatatacttgaactgcggacagttgcccagcag
tatcaggaaatatccccgcccgaagggctttcggcttttctggaaagcgtggcattggta
tcagatttagacagccttgaagaaggtgtttcggctgttacccttatcaccctgcatcag
gccaaagggctggagtacccggtggttttcatggtgggtatggaagagggtgtcctgccg
cacagccgttcgtttgatgaccccgcccagatgcaggaagaacgccgcctgtgttatgtg
ggtgtaacccgtgcccgcaaacggctttacctggtgcgggctttccgccgctcccttatg
gggcagagcaatgtaaacgaaccatcacgttatcttaaggatataccccagggtatcacc
aaaggccgtgaaaaacagcccttgtccgggcagcatactgccgcttcggcagcttcacct
gttatcaaacagcatctgcaaagtgcgggtatgcccattaagtctgccgctgctcccgcc
cccaaactgctggaactggaagcgggtgataaggtgctgcacccccagtttggcgaaggg
attgtaaccagtatcaaccgggtaaaaaatgatgccgaggttatgatatctttccattcg
gtaggcatgaaacgcctgatgctcagctttgcccgcctgaccaaactagaaaactag
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