Dehalococcoides sp. UCH007: UCH007_11150
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Entry
UCH007_11150 CDS
T03880
Symbol
gspF
Name
(GenBank) type II secretion system protein F
KO
K02653
type IV pilus assembly protein PilC
Organism
duc
Dehalococcoides sp. UCH007
Brite
KEGG Orthology (KO) [BR:
duc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
duc02044
]
UCH007_11150 (gspF)
02035 Bacterial motility proteins [BR:
duc02035
]
UCH007_11150 (gspF)
Secretion system [BR:
duc02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
UCH007_11150 (gspF)
Bacterial motility proteins [BR:
duc02035
]
Pilus system
Pilus assembly proteins
UCH007_11150 (gspF)
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Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF2207_C
Motif
Other DBs
NCBI-ProteinID:
BAQ35073
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Position
1078593..1079798
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AA seq
401 aa
AA seq
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MDFNYVAYGQDKRLVKGKIPATSLEAAQRLLSHSGYQILSIKPITPFFSTTSSFNFSTVK
PREVILFSRQLALLLESGTDIVTSLELLQEQTTNKLFRDIIGEIVNDIRGGSSLSLAMSK
HPKAFPPLYHRVIAAGEQGGSLEIVLRNLANFVQRNVETEKKIKSALTYPGVVAVVGILV
LLLMVTFVLPAFTSLYSQMGTELPTPTKILIGLSDFFEAWGMYVTGAFVIAIAALVIYMR
TPMGRYHRDRIALKLPVIGRILLLSELSRACQTMSLLFKAGLPLPEIMNQATTAANNKLI
SNALAEVQHDLIRGEGLSRPMTKNPLFLPMMVQMVSVGEETGKLDDTLSTVSATYDTEAD
DRISAAIGMIQPIMTIGIGLVVGFIAVALVSSMYSLYGQIG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggattttaattatgtagcttacgggcaggataagaggcttgtaaaggggaaaatcccg
gctacttcactggaggcagcccagagactgctgagccatagcggttaccagattttaagc
atcaaacccattacgcccttcttcagcaccaccagttcatttaacttctcaacggtaaaa
cccagagaagttattctgttttcccgccaattggctttgctgcttgaatccggtacggat
attgtaacttcactggaattacttcaggaacagactaccaataaacttttccgggatatt
atcggcgaaattgtaaatgatatacgcggagggagttcgctgtctctagcaatgagtaag
caccccaaggctttcccgcctttgtatcaccgggtcattgcggccggtgaacagggaggc
agccttgagatagtgctccgtaatctggccaactttgtccagcggaatgtagaaaccgaa
aagaaaattaaaagcgccctaacctatcccggtgtagttgcggtggtaggtattctggtg
ctgttgcttatggttacattcgtactacctgcatttaccagtttatactcccaaatgggc
actgaactgcccaccccgactaaaatacttataggcctgagtgatttctttgaggcatgg
ggtatgtatgtaacaggggctttcgtaatagcgatagctgcgctggtgatttatatgcgg
acaccaatggggagataccatagagaccgcatagcccttaaactacctgtaatcgggcgt
attctgctcctttcagagctttcacgcgcctgccagaccatgtcattgctgtttaaggcc
ggcctgccgttgcctgaaattatgaaccaagccaccactgcggcaaacaacaaacttatc
agcaacgcactggccgaagtacagcatgatctgataaggggcgaagggctttcccgtccc
atgactaaaaacccgctctttctgcctatgatggttcaaatggtaagcgtgggtgaggaa
accggtaaacttgacgacacattatctaccgtatcagctacctatgataccgaagctgac
gaccggataagtgctgccataggcatgatacaacccattatgactataggtatcggtttg
gtagtaggctttattgccgttgccctggtatcttccatgtactccttatacgggcagatc
ggctaa
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