Dehalococcoides sp. UCH007: UCH007_11510
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Entry
UCH007_11510 CDS
T03880
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
duc
Dehalococcoides sp. UCH007
Pathway
duc03030
DNA replication
duc03410
Base excision repair
duc03420
Nucleotide excision repair
duc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
duc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UCH007_11510 (polA)
03410 Base excision repair
UCH007_11510 (polA)
03420 Nucleotide excision repair
UCH007_11510 (polA)
03440 Homologous recombination
UCH007_11510 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
duc03032
]
UCH007_11510 (polA)
03400 DNA repair and recombination proteins [BR:
duc03400
]
UCH007_11510 (polA)
Enzymes [BR:
duc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UCH007_11510 (polA)
DNA replication proteins [BR:
duc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
UCH007_11510 (polA)
DNA repair and recombination proteins [BR:
duc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
UCH007_11510 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UCH007_11510 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH
RecR_HhH
nSTAND_NTPase4
HHH_2
DNA_pol_lambd_f
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
BAQ35109
UniProt:
A0A0C6E2W9
LinkDB
All DBs
Position
complement(1111733..1114444)
Genome browser
AA seq
903 aa
AA seq
DB search
MNKPVIVLFDGTNLVHRAYHVLPPLAIRKTGEVVGAAFGFASILIKVLTDLKPDCYAISF
DRKGPTFRHEMFKDYKAQRPPMPDELVSQLGRVRQIVDAFNMPVYEQSGFEADDVLGTLA
TRAAAAGMEVIIASGDADSMQLVGPDIRILYPGPAGSFASTSLYDEAAVRAKYGLGPEHI
ADYKALMGDPSDNIPGVPGIGPKTAQKLIEEYGGIEDIYKNLDKISPPGLQKKLADNAEV
ARDSKILTTIVRDLPLDFSIEECRAEHYNRQKVVDLFRELEFFRLIDRLPGGENQLQGTP
DMFAAAPKVETRYTVADSQNIDSIVKRLANAKELALAVSGTPEEAMDARLTALALSSVAG
DACFVPAEFIGSASEGQMFTTEGHSGLAALLGDEKICKTAHNAKYLMNLLLSAGQEVKGL
DFDTMIAAHLLGEKNLAIKDLIFEHFGIEIADIENILTRNGKKTIFSEVQLSEAAQLAAD
YTFRLKGIFAAQLAETKLMDLFARVEMPLLPILLGMERTGIMLDTDLLKAMAEKTGRQIF
KLEEDIYAQAGHSFNIGSPQQLGRILFDELKLPVIKKTKTGYSTGAEVLEELKGKHRIVD
LILEYRMLVKLKSTYLDTLPRMVNLHTRRLHTSFNQTRTATGRLSSSEPNLQNIPVRGEM
GREIRRAFIAPPCTVLLAGDYSQIDLRVLAHLSQDPALIEAFQSDQDIHTATAARLLNIS
PSKVTKEQRRLAKTVNFGVIYGMSSYGLEQATELSLEEADKFIKAYFEKYPRVAVYFAEI
KQQARTQGYVETLLGRRRYIPEINSPNRILRESAERMAINMPVQGTSADIIKLAMVRLDE
KIKEEKLKSRLLLQVHDELIFEVPTAELGRMRDLLVETMSGAVAFEIPLKVELKSGANWG
DME
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacctgtaatagtcctctttgacggtactaatctggtccaccgcgcgtatcat
gtacttcctccgcttgcaatccgcaaaacaggtgaagtagtgggtgccgcttttggtttc
gcctccatactgattaaagtcttaacagaccttaaaccggattgttacgccatatccttt
gacagaaaaggcccaaccttccgccatgaaatgttcaaagattacaaagcccagcgtccg
cctatgcctgacgaactggtcagccagctggggcgggtacgccagattgtagatgctttt
aatatgccggtatacgaacagagcggctttgaggctgatgatgtgctgggtacgctggca
accagagccgctgccgcaggtatggaggttattatagcctccggagacgcagattccatg
cagctggtcgggccggatatccgcattttgtatcccggtccggcaggttcttttgccagc
accagtttgtatgacgaggcggcggtaagggcaaaatacggtttggggccggagcatatt
gcagattacaaagcccttatgggtgacccgtctgacaatatccctggagtacccggcata
ggcccgaaaaccgcccagaaacttatagaagagtacggcggcatagaagatatttataaa
aatctggataaaataagcccgcccggtcttcagaaaaagctggcagacaatgccgaagta
gcccgtgacagtaaaatactgacaactatcgtgcgtgatttgccgcttgatttcagtatt
gaggaatgccgggcagagcactataaccgccagaaagtggtagacctattccgcgagctg
gagtttttcaggctgattgaccgcctgccgggaggggaaaaccagcttcagggtacgccg
gatatgttcgctgccgctccaaaggttgaaacccgctatacggtggcagacagccaaaat
atagacagcatcgttaaacgcctggcaaatgccaaagagctggcgctggcggtttctggt
actcccgaagaagctatggatgcccgcctgacggcactggcactttcaagtgtggcgggt
gatgcttgttttgtacccgctgagtttatcggcagtgcttcagaagggcagatgtttacc
accgaagggcattccggcttggcagctctgcttggtgatgaaaaaatatgtaaaaccgcc
cataacgccaagtaccttatgaatttgcttttatctgccgggcaagaagtaaaagggctg
gattttgataccatgattgccgcccatctgctgggtgaaaaaaatctggctatcaaagat
cttatctttgagcatttcggcatagagattgcggatattgaaaatatactgacccgaaac
ggcaaaaaaaccattttcagcgaggttcagctttcagaagcagcccagcttgcggctgat
tacactttccgcctcaaaggtatctttgccgcccagcttgccgaaaccaagctgatggat
ttatttgccagggtggagatgccccttttgcccattctgctgggtatggaacgcacaggc
attatgctggatacagatttgctgaaggctatggctgaaaagacaggcaggcagatattt
aaactggaagaagatatctatgcccaggcagggcatagctttaacataggctccccccag
cagctggggcggatactctttgacgaactgaaactgccggttatcaaaaagaccaaaact
ggttattccaccggggcagaggtgcttgaagagctgaagggcaagcaccgtattgtagac
ctgatactggaataccgtatgctggtaaagctgaaatctacctatctggataccttgccg
cgtatggtaaacctgcatacccggcggctgcataccagtttcaaccagacccgtacagct
accggcaggttatcttcttccgagcctaatctgcaaaacatacctgtcaggggggaaatg
ggcagggagatacggcgggcatttattgcacctccatgcacagtgctgctggctggagac
tattcccaaatagacctcagggtgctggcccatctttcccaagaccccgccctgatagag
gctttccaaagtgaccaggatattcacaccgctaccgccgccagattgcttaacatttcc
ccgtccaaagtgactaaagaacaacgccgcttggctaaaaccgtaaatttcggggtgata
tacggcatgagcagctacgggctggaacaggctaccgagctttcgctggaagaagctgac
aagtttataaaggcttattttgaaaaatatccgcgggtggctgtttactttgcggaaatt
aagcagcaggcacgtactcagggttatgtggaaaccctgctgggcagacgccgctatatt
ccggaaatcaattcacccaaccgtattctgcgtgaatcagccgagcgtatggctatcaat
atgccggtacaggggacatctgctgacattatcaagctggctatggtccggctggacgaa
aagattaaagaagaaaagctgaaaagccgcctgctgcttcaggtgcatgatgagcttata
tttgaagtgcccacagcagagcttgggcggatgcgtgatttgcttgtagaaaccatgtca
ggtgcagttgcctttgaaataccgctcaaggttgagcttaagtccggggctaactgggga
gatatggagtaa
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