Duganella dendranthematis: HH213_00580
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Entry
HH213_00580 CDS
T06560
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
dug
Duganella dendranthematis
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dug03009
]
HH213_00580 (dbpA)
Enzymes [BR:
dug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HH213_00580 (dbpA)
Ribosome biogenesis [BR:
dug03009
]
Prokaryotic type
rRNA helicases
HH213_00580 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
WSD
Motif
Other DBs
NCBI-ProteinID:
QJD88739
LinkDB
All DBs
Position
113991..115400
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AA seq
469 aa
AA seq
DB search
MTSTSFASLPLTPAFLDNLDSLGYKEMTTIQAQSLPSVLEGRDLIAQAKTGSGKTAAFGI
GILAKLNPAWFAVQALVLCPTRELADQVANELRRLARSTGNVKVLVLTGGSPMRPQIASL
EHGAHIIVGTPGRVRDHLGRETLDLSKVSTLVLDEADRMTDMGFYDEIAGIVSACPKRRQ
TLLFSATYPDDIRRATDDFLVDPVEVTVEAQHDNDKIEQLFFEIGFDGRNDAVARLLGHY
KPVSAIAFCNTKVQCRELVESLQQKGFSAMALYGELEQRERDEILILFANRSCSVLVATD
VAARGLDIPNLEAVINVDVSKDTEVHIHRVGRTGRGDEQGLALSLCAPNEKKWVKLIEEY
QGQPVEWFDLKSLDDNEYGVDPAPMMTLVISGGKKDKLRPGDVLGALTGDAGLSKEQVGK
INVTEFQTYVAIDRRVAYDAFANLSKGNPLGGDFGAFKGRNFKMRFIDA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacttccacctccttcgccagcctgccgctgacacccgccttcctcgacaacctcgac
tcgctcggctacaaggagatgaccacgatccaggcgcaaagcctgccgtcggtgctggaa
ggccgcgacctgatcgcccaggccaagaccggcagcggaaagaccgccgcctttggcatc
ggcatcctggccaaactgaatcctgcatggtttgcggtgcaggcgctggtgctgtgccct
acccgcgaactggccgaccaggtggcgaatgaactgcgccgtctggcccgttcgaccggc
aacgtcaaggtgctggtgctgaccggcggttcgccgatgcgtccacaaatcgcctcgctg
gaacacggcgcccatatcatcgtcggcacgccgggccgcgtgcgcgatcacctgggccgc
gagacgctggacctgtccaaggtgagcacgctggtgctggacgaagcggaccgcatgacc
gacatgggcttctacgacgaaatcgccggcattgtcagcgcctgcccgaaacgccgccag
accttgctgttctcggccacttacccggacgacatccgccgcgccaccgacgacttcctg
gtcgatccagtcgaggtcacggtcgaagcacagcacgataacgacaagattgagcagcta
ttcttcgagatcggtttcgacggccgcaatgacgccgtggcacgcctgctgggccactac
aagccggtatcggcgatcgccttctgcaacaccaaggtacagtgccgcgaactggtcgag
tccttgcagcagaaaggcttttccgcgatggcgctgtatggtgagctggagcagcgtgag
cgcgacgagatcctgatcctgttcgccaaccgtagctgctccgtactggtggccaccgac
gtcgccgcgcgcggcctggatattccgaatctggaagcggtgatcaacgtcgacgtctcc
aaggacaccgaggtgcacattcaccgcgtcggtcgtaccggccgtggcgacgaacagggc
ctggcgctgtcgctgtgcgcaccgaacgagaagaagtgggtcaagctgatcgaagaatat
caaggccagccggtcgagtggttcgacctgaaaagcctggacgacaacgaatacggcgtc
gatccagcgccgatgatgacgctggtgatttcgggcggtaagaaagacaagctgcgtccg
ggcgacgtgctgggcgcactgaccggcgacgctggcctgagcaaggaacaagtcggcaag
atcaacgtgaccgagttccagacctacgtcgccatcgaccgccgcgtggcgtatgacgct
ttcgcaaacctcagcaagggcaatccgctgggcggcgacttcggcgcctttaaaggccgc
aacttcaagatgcgctttatcgacgcctga
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integrated database retrieval system
