Duganella dendranthematis: HH213_02035
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Entry
HH213_02035 CDS
T06560
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
dug
Duganella dendranthematis
Pathway
dug03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HH213_02035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dug03400
]
HH213_02035
Enzymes [BR:
dug01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HH213_02035
DNA repair and recombination proteins [BR:
dug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HH213_02035
Prokaryotic type
HH213_02035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CO4A-B_CUB_C
GtrA_DPMS_TM
Motif
Other DBs
NCBI-ProteinID:
QJD88999
LinkDB
All DBs
Position
complement(412717..413493)
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AA seq
258 aa
AA seq
DB search
MTIPSTILEALQRADVSWRPLLIEGLEAMMAATPDYLPQLAQDQYLPTEQRLFAAFALPL
NKVKYVLVGEGPYPRAESATGVCFMDGAVGGLWSEESGGGLSKPVNKATSLRNFMKMLLV
ADGQLQLSNTAGEAMAAVSARARSGAGSHILTLADMQRKLTEQGFLLLNASLVFRSHVAP
VKDAKAWLPFFETVMAGLAGQAATVPTMVLWGKIAELLSKLPVMKDFPQIVAEHPYNLSF
IGNQAMHELFRPMRLLQG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgacgattccaagcactatcctggaggcgctgcagcgcgccgatgtttcctggcgcccg
ctgctgatcgaggggctggaagccatgatggcggccacgcccgactacctgccgcaactg
gcgcaggatcagtacctgccgaccgagcaacgcctgtttgccgcgttcgcattaccgctc
aataaggtgaagtatgtactagtcggcgaaggaccatatccgcgagcagagagcgccacc
ggcgtctgtttcatggatggcgcggttggcggtctgtggtcggaggaaagcggtggcggc
ttgtctaagccggtcaacaaggccacctcgctgcgcaacttcatgaagatgctgctggtg
gccgatggccagctccagctgagcaataccgccggcgaagccatggcggccgtatcggcc
cgggcgcgcagtggcgcgggcagccacatcctcacgctggccgatatgcagcgcaagctg
accgaacagggtttcctgctgctgaatgcctcgctggtgttccgcagccacgtggcgccg
gtcaaggatgccaaggcctggctgccgttctttgagacagtgatggcggggctggccggg
caagctgccaccgtgccgaccatggtgctgtgggggaaaatcgctgaattgctgagtaag
ttgccggtaatgaaagatttcccgcagattgtcgccgagcatccgtataacctcagcttc
ataggtaatcaggccatgcacgagctgttccggccgatgcgcctgctccagggctaa
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