KEGG   Duganella dendranthematis: HH213_02115
Entry
HH213_02115       CDS       T06560                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
dug  Duganella dendranthematis
Pathway
dug03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dug00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HH213_02115 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dug02044]
    HH213_02115 (tssH)
Secretion system [BR:dug02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HH213_02115 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 Clp_N ClpB_D2-small NBD_SMAX1 AAA_22 AAA_16 nSTAND3 AAA_29 ATPase_2 Sigma54_activat AAA_7 T2SSE AAA_25 TniB NACHT ResIII SLFN-g3_helicase Knl1_RWD_C DUF815 Zeta_toxin SRP54
Other DBs
NCBI-ProteinID: QJD89015
UniProt: A0ABX6M3Z7
LinkDB
Position
complement(430392..433001)
AA seq 869 aa
MNLNLKTLIGKLNDTTRLAATRAASICVALGQYEVEVEHLLLALLEQERSDVVLIARQCG
ANIEALEADLHQEISQFKTGSTRTPVFSRHLPLLLENAWLIASLATPPAPIRSAHLLVAL
LTEPELEQLAQRASQQFAKIPIDEVKHQLQKYTHGSQEETTAAPDTAAEPLTGIPQAGSP
RTPALDQYTTSLTRQARDGKLDPVIGREKEIRQVVDILLRRRQNNPILTGEAGVGKTAVV
EGLALRVAAGDVPVSLKDVEIRLLDMGLLQAGASVKGEFENRLKNVIDEVKQSPHAIILF
IDEAHTMIGAGGTAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVV
KVDEPDEDIASAMLRAMAPLMEQHFGIRIRDEAVTEAVRLSHRYISGRQLPDKAVSLLDT
ACARVALAQSGTPALLEDAARQMERIASEISALQREEDGKAPQQRAQQRLQQLQAEHAAL
AEEHARHAERWQREQSIVAAITRQRTADGSAAEVRALKEELLALQGETPMVPLEVDGVTV
AAIVSGWTGIPLGKMVKDEINTVLRLQDALQSRILGQSHAMAAVAQRVRTARANLDDPNK
PKGVFLFVGPSGVGKTETALALADLLYGGERKLLTINMSEYQEAHSVSGLKGSPPGYVGY
GQGGVLTEAVRRNPYSVVLLDEIEKAHPDILELFFQVFDKGVMDDAEGREIDFRNTIIIA
TANAGSATIMQACLNQETLPQPEELEALLRPQLVKHFKPAFLGRVKVVPYYPIPDAVLSG
IITLKLARIAQRIRAHHHAEFTYDASLVNAVLARCTEVDSGARNVDHILNGTLLPEIAQA
VLEKMAQEEPITQIKVGANSKGQFKYTVK
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgaatctcaatctcaaaacgctgatcggcaaattgaatgacaccacgcgcctggccgcc
acccgcgccgccagcatctgcgtggcactcgggcagtacgaggtggaagtggaacatctg
ttgctggcgctgctggaacaggagcgcagcgacgtcgtgctgatcgcgcgccagtgcggc
gccaacatcgaggcgctggaagcggacctgcatcaggaaatcagccagtttaagactggc
agcacgcgcacgccggtattttctcgccatcttccgctgctgctggaaaacgcatggttg
atcgcatcgctggcgacgccgccggcaccgatccgcagcgcgcatctgctggtggcgctg
ttgaccgagccggaactggagcaactggcgcagcgcgcctcgcagcagtttgccaaaatc
ccaatcgacgaagtcaaacatcaactgcagaagtacacgcatggctcgcaggaagagaca
accgcagcccccgacaccgccgccgaaccgcttaccggtataccgcaagccggtagcccg
cgcacgccggcgctggaccagtacaccaccagcctgacgcgccaggcgcgcgacggcaag
ctcgatccggtgatcggacgagaaaaggaaatccgccaggtggtggacatcctgctgcgc
cgccgccagaacaatcccatcctgaccggcgaagccggcgtcggaaaaactgccgtggtg
gaaggcctggcgttgcgcgtggccgccggcgatgtacccgtgtcgctgaaggacgttgag
atccgcctgctggatatgggcttgttgcaggccggcgccagcgtcaaaggcgagtttgag
aaccgcctcaaaaacgtcatcgacgaagtgaagcaaagcccgcatgccatcatcctgttc
atcgacgaagcccacacgatgatcggcgccggcggcacggccggccagaacgacgccgcc
aacctgctcaagcccgcgctggcgcgtggcgaattgcggaccatcgccgccaccacatgg
agtgaatacaagaagtacttcgagaaggacgctgcgctggcacgccgctttcaggtggtg
aaggtggatgagccggacgaggacatcgccagcgccatgctgcgggccatggcgccgttg
atggagcagcacttcggtatccgcatccgcgacgaagcagtgactgaggcggtgcgcctg
tcgcaccgctacatcagcggccgccagttgcccgacaaagcggtcagccttctggatacg
gcctgcgcgcgcgtggcgttggcgcagagcggcacgccggcattgctggaagacgccgcg
cgccagatggagcgcatcgcctccgaaatctcggccttacagcgcgaggaagacggcaag
gcgccgcagcagcgcgcgcagcaacgtttgcagcagctacaggcggagcacgcagcgctg
gcggaggagcatgcacgtcacgccgaacgctggcagcgcgaacaatccatcgtcgcagct
atcacccgtcagcggacggcggacggcagcgcggcggaagttcgcgccttgaaagaggaa
ctgcttgcgctgcaaggcgaaacgccgatggtgccgctggaagtggatggtgtcacggtg
gcggcgattgtctccggctggaccggcatcccgctgggcaaaatggtcaaggacgaaatt
aacactgtgctgcggctacaggacgcgctgcaatcccgcatcctcggccaatcgcatgcc
atggccgccgtggcgcagcgcgtgcgtaccgcgcgcgccaatctggatgatcccaacaag
ccgaaaggggtgttcctgttcgttggcccatccggcgtaggcaagaccgagaccgcactg
gcgctggccgacctgctgtacggcggcgaacgcaaactccttactatcaacatgagcgag
taccaggaagcgcacagcgtctccggcctgaaaggttccccgcccggttacgtgggctat
ggccagggcggcgtgctgaccgaagcagtgcgccgcaatccctatagcgtggtgctgctg
gatgaaatcgaaaaagcgcatccagacattctcgaactattcttccaggtgtttgataaa
ggtgtcatggacgatgccgagggccgcgagatcgatttccgcaacaccatcatcatcgcc
accgccaatgccggatcggccaccatcatgcaggcctgcctgaaccaggagacactgccg
cagcccgaggagctggaagcgctgctgcgcccacaactggtcaagcacttcaagccggcc
ttcctcgggcgcgtgaaggtggtgccgtattacccgattccggatgcggtgctgagcggg
atcatcaccctcaagctggcgcgcatcgcccagcgcatccgcgcgcatcatcatgccgaa
tttacctacgacgcttcgctggtgaacgccgtgctggcgcgctgcaccgaagtcgattct
ggcgcgcgcaatgtggatcacatcctcaacggcacgctgctgccggagatcgcgcaggcg
gtgttggagaagatggcccaggaagagccgatcacgcagatcaaggttggcgccaacagc
aagggccagttcaaatacaccgtcaaatag

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