KEGG   Duganella dendranthematis: HH213_04020
Entry
HH213_04020       CDS       T06560                                 
Name
(GenBank) recombinase RecA
  KO
K08482  circadian clock protein KaiC
Organism
dug  Duganella dendranthematis
Brite
KEGG Orthology (KO) [BR:dug00001]
 09190 Not Included in Pathway or Brite
  09193 Unclassified: signaling and cellular processes
   99995 Signaling proteins
    HH213_04020
SSDB
Motif
Pfam: ATPase AAA_25 NACHT nSTAND3 NPHP3_N AAA_22 IstB_IS21 Rad51 DnaB_C RecA AAA_16 SLFN-g3_helicase AAA_14 ResIII AAA_30 ArsA_ATPase CbiA ATP-synt_ab MEDS PAXNEB PhoH AAA_31 SRP54 APS_kinase CobA_CobO_BtuR cobW NB-ARC
Other DBs
NCBI-ProteinID: QJD89347
LinkDB
Position
851562..853031
AA seq 489 aa
MDYLPHLQPCAMHNRLSQRIPLLSTNIPGLDDILGGGFPAHSLYLIQGLAGSGKTTLACQ
IGFQHAHQGKKVLILTLIAETHGKMLNHLSNFSFFDEQLVGERIVFIGAYSDLLKGGLRE
LLKSIAATLAEQQPDIMIIDGFRTVREAKPSDVALSEFMLSLNSLVSTMECTTFLLSPTE
GNVADSENTLVDGLIELSQYERGLQLIREIKVFKLRGSKHLLGRHVFEVGEDGVEIYPRL
EAVSSLSPAMPTAAAGRVSFGIPGWDGLTKGGVARGSTTALLGNPGVGKTLMGLHFIHEG
LQRGEQALIIGFYESPQRLLEKARSVGLDLATYFHNGALQIIWHPPLEVLVDSLANGLLR
NIEQRGVTRLLIDGIDGLREIVMHEGRSRSFLAALVNELRVRNVTTFFTQELPYFGAGTV
QGEVTASMLFENIILLRYVDVAGINLRQIGVLKLRENGYDAANHVLLISDLGMSIDGPVS
PSVPPVLNR
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggattatttgccgcatctacaaccttgcgccatgcacaaccgcctctcccagcgcatc
cctctgctcagcaccaacattcccggccttgacgacatcctgggcggcggctttcccgcg
cacagcctgtacctgatccagggcctggccggcagcggcaagaccacgctggcctgccag
atcggtttccagcacgcgcaccagggcaagaaggtgctgatcctgacgctgatcgccgaa
acccacggcaagatgctgaatcacctgagcaacttctcgttcttcgacgaacaactggtg
ggcgaacgcatcgtcttcatcggcgcctacagcgacctgctcaagggcggcctgcgcgaa
ctgctcaaatcgatcgccgccacgctggccgagcaacagcccgacatcatgatcatcgac
ggcttccgcaccgtgcgcgaggccaagccgtccgacgtggcgctgtccgaattcatgctc
tcgctcaattcgctggtgtcgaccatggaatgcaccaccttcctgctgtcgcccaccgaa
ggcaatgtggccgattcggaaaacacgctggtcgacggcctgatcgaactgagccagtac
gagcgcggcctgcaactgatccgcgagatcaaggtcttcaagctgcgcggcagcaagcac
ctgctgggccgccacgtgttcgaggtgggcgaggacggcgtcgagatctatccgcgcctg
gaagcggtcagcagcctgtcgccggccatgccgaccgcggcggcgggccgggtcagcttc
ggcatccccggctgggacggcctgaccaagggcggcgtggcgcgcggctcgaccaccgcc
ctgctcggcaatccgggcgtcggcaagacgctgatgggcctgcacttcatccacgaggga
ctgcagcgcggcgaacaggcgctgatcatcggcttctacgagtcgccgcagcggctgctg
gaaaaggcgcgcagcgtcggcctcgatctggccacctatttccataacggcgcgctgcag
atcatctggcatccgccgctggaggtgctggtcgacagcctggccaacggcctgctgcgc
aacatcgaacagcgcggcgtgacgcggctgctgatcgacggcatcgacggcctgcgcgaa
atcgtcatgcacgagggccgctcgcgctcgttcctggcggcgctcgtcaacgaactgcgg
gtgcgcaacgtcaccaccttcttcacccaggaactgccgtatttcggcgccggcacggtg
cagggcgaggtcaccgcctcgatgctgttcgaaaacatcatcctgctgcgctatgtggac
gtggccggcatcaacctgcgccagatcggcgtgctcaagctgcgcgaaaacggctacgac
gccgccaaccacgtgctgctcatttccgacctgggcatgagcatcgacggccccgtgtcc
cccagcgtgccgcccgtgctgaaccggtag

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