Duganella dendranthematis: HH213_04410
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Entry
HH213_04410 CDS
T06560
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
dug
Duganella dendranthematis
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dug03009
]
HH213_04410
Enzymes [BR:
dug01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
HH213_04410
Ribosome biogenesis [BR:
dug03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HH213_04410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TBP-TOTE
Motif
Other DBs
NCBI-ProteinID:
QJD89413
LinkDB
All DBs
Position
complement(934729..935445)
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AA seq
238 aa
AA seq
DB search
MSKLSLDRILQSQGYGTRKYCRSLIEDGEVTINGVVHDNYKETIDTDGLVFNLFDEDVVY
REHVYIALFKPQNYECSRKPSHHPGVLTLLPEELTWRDVQPVGRLDHDTTGMLLMSDDGA
FIHAQSSPKRHVPKIYQATTAEPVTDELIAQLLAGVQLHDEPAPLAAQTCIKRGEFQLEI
VLEQGKYHQVKRMLAAAGNHCSALHRSAIGGLELVSLGIEEGDWCYLTPEQLALLTPA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaattatccttggaccgcatcctgcaatcgcagggctatggcacccgcaaatac
tgccgctccctgattgaggacggcgaagtcaccatcaacggcgtggtgcacgacaattac
aaagaaaccatcgacaccgacgggttggtattcaacctgttcgacgaagacgtcgtgtac
cgcgaacacgtctatatcgcgctgttcaagccgcagaactacgaatgttcgcgcaagccc
agccaccatccgggcgtattgaccctgctgccggaggaactgacctggcgcgacgtgcag
ccggtcggccggctcgaccacgacaccaccggcatgctgctgatgtcagacgatggcgcg
tttatccatgcgcaatcgtcgccgaagcggcatgtgccgaagatttatcaggccaccacg
gctgagccggtcaccgatgaactgatcgcccagctgctggccggcgtgcagctgcatgac
gaaccggcgccgctggcggcgcagacctgcatcaagcgcggcgaattccagctggaaatc
gtgctggagcagggcaaataccaccaggtcaagcgcatgctggctgcggccggcaaccat
tgctcggcgctgcaccgttccgccatcggtggcctggagctggtgtcgctgggcatcgag
gagggcgactggtgctacctgacgcctgaacaattggctttgctgacgccggcatga
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