Duganella dendranthematis: HH213_06235
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Entry
HH213_06235 CDS
T06560
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
dug
Duganella dendranthematis
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dug03036
]
HH213_06235 (xerD)
Chromosome and associated proteins [BR:
dug03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HH213_06235 (xerD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
QJD89736
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All DBs
Position
complement(1343035..1343937)
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AA seq
300 aa
AA seq
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MAADNFALIDEFCDSLWLEDGLSKNTLEAYRRDMRLFAGWLEKKRPDVGGLLAVAAHDIE
SYIGARHEQGKATSSNRRLSVIRRFYQMLQRQRRIEDDPSLKLVSAKQPQRFVHTLSEAQ
VEALLAVPDVNTPLGLRDRTMLELMYASGLRVSELVDLKMLELSLNDGVLRVTGKGAKTR
LVPFGQQARVWIERYVNGARGVILNGQQDDALFVTARGAGMTRQMFWVLIKKHALNAEIK
TPLSPHTLRHAFATHLLNHGADLRVVQLLLGHSDISTTQIYTHVARERLKHLHAQHHPRG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagacaactttgctctgattgacgagttctgcgacagcctgtggctggaagac
gggctgtcgaagaatacgctggaagcctaccggcgcgatatgcgtttgttcgccggctgg
ctggaaaagaagcggccggacgtcggcggcctgctggcggtggccgcccacgatatcgaa
agctatatcggcgcgcgccatgagcagggcaaggcgacctcgtccaaccggcgactatcg
gttatccgacgcttctaccagatgttgcagcggcagcgccgtatcgaggacgatcccagc
ctgaagctggtgtcggccaagcagccgcagcgctttgtgcatacgctgagcgaagcgcag
gtggaggccttgctggccgtgccggatgtcaataccccattgggcttgcgcgaccgcacc
atgctggagctgatgtacgccagcggcctgcgggtgtccgagctggtcgacctgaagatg
ctggaactgagcctgaacgacggcgtgctgcgggtgaccggcaagggcgccaagacgcgg
ctggtgccgtttggtcagcaggcgcgggtctggatcgagcgctacgtcaatggagcgcgc
ggcgtcatcctcaacggccagcaggacgacgcgctgttcgtcaccgcgcgcggcgccggc
atgacgcggcagatgttctgggtactgatcaagaagcatgcgttaaacgcggagatcaag
acgccgctgtcgccgcacacattgcggcacgcgtttgccacccatttgctgaaccacggc
gccgacttgcgtgttgttcaattgctactgggacactccgatatctcgaccacgcagatc
tatacacacgtcgcccgcgaacgcctcaagcatttgcatgcgcaacatcatcctcgcggg
tga
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