Duganella dendranthematis: HH213_12170
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Entry
HH213_12170 CDS
T06560
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
dug
Duganella dendranthematis
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dug03000
]
HH213_12170
Transcription factors [BR:
dug03000
]
Prokaryotic type
Helix-turn-helix
LacI family
HH213_12170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_IclR
HTH_Crp_2
MarR_2
HTH_36
Sigma54_DBD
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QJD90773
LinkDB
All DBs
Position
2654736..2655752
Genome browser
AA seq
338 aa
AA seq
DB search
MNLAHLANHLGMSKTTVSRALNGYPEVNVRTRERVLKAAKEVGYQPNPMARSLALGRTNV
FGIIYPLLPTDLGDPMFLDVVAGMSAALEAVNKNLIIAPVSPAAEQPSYQQIVRGRRVDG
LVVGRTLVRDERIAFLSKAKFPFVAHGRTELNVPYAWFDYDNEAGVRIAMERLLGLGHQR
VALISAPLELNFARQRKDSFVTALSVAGLSADPRYLIDNTLDRRSGYQAMQQLLACSPRP
TAVIVDNHLSGVGAVRALLDAGVEIGKEMSVIVWGSMADTLAGAHVTTIDQPDPRQAGAR
MVEMLLSLVDGTPAGDLHELWQPVLLEGATVGRITDHQ
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgcgcacctggcaaatcaccttggcatgtccaagactacggtgagccgggcg
ttaaacggttaccccgaagtcaatgtgcggacccgcgagcgggtgctgaaggcagccaag
gaggtcggctaccagccgaatccgatggcgcgttcgctggcgctggggcgcaccaatgtc
tttggcatcatctatccgctgctgccgacggaccttggcgatccgatgttcctcgacgtg
gtggccggtatgtcggccgcgctggaagcggtcaacaagaacctgatcatcgcgccggtg
tcgccggcggccgagcagccgtcgtaccagcagattgtgcgtggacggcgggtcgatggc
ctcgtcgtgggccgcacgctggtgcgcgatgagcgtatcgcgtttctcagcaaagccaaa
ttcccatttgtagcgcatggccgcacggagttgaatgtgccgtatgcgtggttcgactac
gacaacgaggccggtgtgcgcatcgccatggagcgcttgctgggattgggccatcagcgc
gtggcactcatcagcgcgccgctggaattgaatttcgcgcggcagcgcaaggacagtttt
gtcaccgcgctgtcggtggccggcctgtctgccgatccacgctacctgatcgacaatacg
ctggaccgccgcagcggctaccaggccatgcagcagctgctggcttgctcgccgcggccg
acggcggtcatcgtcgacaaccatctatccggcgtcggcgcagtgcgcgcattgctggac
gcgggcgtggagatcggcaaggagatgtcggtcatcgtctggggcagcatggccgacacg
ctagccggcgcccacgtcaccactatcgaccagcccgacccgcgtcaggctggcgcgcgc
atggtcgagatgctgctgtccctcgtcgacggtacccccgccggcgacttgcacgaactg
tggcagcccgtgttgttagaaggcgctactgtgggccggatcaccgatcaccagtag
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