Duganella dendranthematis: HH213_12190
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Entry
HH213_12190 CDS
T06560
Name
(GenBank) pectate lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dug
Duganella dendranthematis
Pathway
dug00040
Pentose and glucuronate interconversions
dug01100
Metabolic pathways
dug02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HH213_12190
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HH213_12190
Enzymes [BR:
dug01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HH213_12190
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Paralog
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QJD90777
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Position
2657343..2658788
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AA seq
481 aa
AA seq
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MKYPLLVAGIVLASSAQAATIDARTLTGASTPLQTAQYGVRNYSAPVLVNGLHDPASYAA
APKLPVWQFAAADPTGGVLTFERDPAPASGWHAQSRKGAVLVTGGGAAIANRVYTVYNGQ
QLVAAINEAGNDPKIIRVIGHIDLRWSQNNTVFREYTSYSDQKYGGSIALPSNTTLVGIN
DAQGRPARITGTALLIGGELPLTAGGDPETDFKKWIADGKDGEDYPTWTRNVIVRNLALD
TPWDVNPEDSDNAYADGVTVSRGQNIYLDHLTISDGDTPDSLATGTYDTRHDGALDVVRG
SDYVTIANSYFAKHHKTTLVGNGDSGRAWSDEGRLHVTFNGNWWNGATTRLPLNRYGQVH
LFNNLITGSTSTKDTDVKFESGTDARYRSNMLLENQYYNFTGLKVTEFCGKAIKGKDFIG
FRSSGHIFTSDKSGTSAVDGQCGYALPPAASVWTPPYAYALQTAAVTLTAVPANAGAGKL
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatccactactcgttgccggcatcgtgctggcttcatccgcgcaagccgccact
attgacgccaggacgttgaccggcgccagcacgcccttgcaaaccgcgcagtacggcgtc
cgcaactactcggcgccggtgctggtcaacggcctgcacgatccggccagttatgcggcg
gcgcccaagctgccggtatggcagtttgccgccgccgatcccaccggcggcgtgctgacc
ttcgaacgcgatccggcgccggccagcggctggcacgcgcagtcgcgcaaaggcgcggtg
ctggtgaccggcggcggcgcggccatcgccaaccgcgtctacaccgtgtacaacggccag
caactggtggctgccatcaatgaagccggcaacgatccgaagatcatccgcgtgatcggc
catatcgatctgcgctggagccagaacaacacggtgttccgcgagtacaccagctattcg
gaccagaagtatggcggctcgatcgcgctgccgtcgaacaccacgctggtcggcatcaac
gacgcgcagggacggccggcgcgcatcaccggcaccgcgctgctgatcggtggcgaactg
ccgttgacggccggcggcgatcccgagaccgacttcaagaagtggattgccgatggcaag
gatggcgaggactatcctacctggacccgcaacgttatcgtgcgcaacctggcgcttgat
acgccgtgggacgtgaacccggaggactcggacaacgcctatgccgacggcgtgacggtg
tcgcgcggccagaacatctaccttgaccatctgaccatcagcgacggcgatacgccggat
tcgctggccaccggcacctacgacacgcgtcacgacggcgcgctggatgtggtgcgcggc
agcgactacgtcaccatcgccaacagctacttcgccaagcaccacaagaccacgctggtg
ggcaatggcgattcggggcgggcgtggagtgacgagggccgtctgcatgtcaccttcaac
ggcaactggtggaatggcgcgaccacgcgcttgccgctgaaccgctatggccaggttcac
ctgttcaacaacctgatcaccggcagcacctcgaccaaggataccgacgtcaaattcgaa
agcggcaccgatgcgcgctaccggtccaatatgctgctggagaaccaatactataatttc
accggcctgaaggtgacggagttctgcggcaaggccatcaaaggtaaagacttcatcggc
ttccgctcatcgggacacatcttcaccagcgacaagtcgggtaccagcgcggtggatggc
caatgcggctatgcactgccgccggccgccagtgtgtggacgccgccgtatgcgtacgcg
ctgcaaacggcggccgtaacgctgacggccgtcccggccaacgccggtgcgggcaagctg
ccgtag
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