Duganella dendranthematis: HH213_13935
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Entry
HH213_13935 CDS
T06560
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
dug
Duganella dendranthematis
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dug03016
]
HH213_13935 (mnmC)
Enzymes [BR:
dug01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
HH213_13935 (mnmC)
Transfer RNA biogenesis [BR:
dug03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
HH213_13935 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
FAD_binding_3
NAD_binding_9
Pyr_redox
Pyr_redox_2
Methyltransf_30
FAD_binding_2
3HCDH_N
GIDA
AlaDh_PNT_C
TrkA_N
FAD_oxidored
Shikimate_DH
HI0933_like
2-Hacid_dh_C
MurD-like_N
Thi4
Lycopene_cycl
ApbA
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
QJD94136
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All DBs
Position
3046878..3048569
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AA seq
563 aa
AA seq
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MRVVLDTEFGRGERFAAARAQGGRLHYIALAAALPPAAAVDDAQLRDAWPLNVPGFHRVI
LNDEVTLDLLVGAVDAVLPQIAARVNAFHLSPDIAPAWARTLAKLAVQGATLHARAADEA
LVWALTAAGFVCRIADDACAAPDIAAVYRSRKPQPAAQDVPVRRAVIIGAGLAGSSAAQR
LCARGWQVTLIERHAQPAQEASGNLAGIFMPLLSKDDNIPTRLSRAAYLFALREWRRMGG
VGTAFLGADCGVLQLARDERHAKVQQDALTQWNYPPQYARWADAREASALIGAPTPHGGW
LFAQGGWARPSSLCEAMLASCGERLQRVFHTEALDLLRVDDQWQVRGADDALIAQAPTVI
LASGAGAGQIAQAAELPLARLRGQVTHLQVEAAAVPPLLPLLPPILPLVVCREAYVTPPS
DGVVCAGATYDNDDDPALRASSQQENLARLAEIIPGDAVAALAHTAPLAGRVGFRVAAPD
RLPLAGALPDYANAGRLECLSDVPRHPGLHCLLGYASRGLIWAPLMAELLVCQLENTPPP
LENTLIDALDPGRFLLKQRRRAQ
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcgtgctcgacaccgagtttggccgtggcgagcggtttgcggcagcgcgcgcg
cagggcggacgtttgcactacattgcgcttgccgctgcattgccgccggcggctgcggtg
gacgacgcgcagctgcgcgatgcgtggccgttgaatgtgccgggctttcatcgcgtgatt
ttgaatgacgaggtgacgctcgatctgctggtgggcgcggtggatgctgtgctgccgcag
attgcggcgcgcgtgaacgcgtttcacctgtcgccggatatagcgccggcatgggcgcgc
acgctggccaagctggcggtgcaaggcgccacgctgcatgcccgcgccgccgacgaggcg
ctggtgtgggcgctgacggcggcgggctttgtgtgccgcatcgctgacgatgcttgcgcc
gcgccggatatcgcggccgtctaccgtagccgtaaaccgcagcctgctgcgcaagatgtg
ccggtgcggcgcgcggtgatcattggcgctggcttggccggttcgtcggccgcgcagcgt
ttgtgtgcgcgcggctggcaggtgacgctgatcgaacgccatgcgcagccggcgcaggag
gcatccggcaacctggccggcatcttcatgccgctgctctccaaagacgacaacatcccc
acgcgcctgagccgcgccgcctacctgtttgcgctgcgcgaatggcgccgcatgggcggc
gtgggcacagcgttcctgggcgccgattgcggcgtgctgcaactggcgcgcgatgaacgt
cacgcgaaagtgcagcaggacgcgctaacgcaatggaactatccaccacaatacgcgcgc
tgggccgatgcccgagaagccagcgccttgatcggcgcgccgaccccgcatggcggctgg
ctgtttgcgcaaggcggctgggcgcggccatcgtcgctgtgcgaggcgatgctggcgtcg
tgcggcgaacgcctgcaacgcgtgttccacaccgaagcgctggacctgctgcgcgttgac
gaccaatggcaggtgcgtggcgcagacgacgcgctgatcgcgcaagcgccgaccgtgatc
ctggccagcggcgccggggctggccagatcgcacaggcagcggagctgccgctggccagg
ttgcgcgggcaggttacccacttgcaggtcgaagccgccgccgtgccgccgctgctgccg
ctgctgccgccgatattaccgctggtggtctgccgcgaagcctacgtcacgccaccgtcg
gacggcgtcgtctgcgccggcgccacctacgacaacgacgacgatccggcgctgcgcgcc
agcagccagcaggagaatctggcccggctggccgaaatcatccctggcgacgccgtggcg
gcattggcgcacaccgcgccgctggccggccgcgtgggcttccgagtggccgcgccggac
cggctgccgctggccggcgcgctgcccgactacgcgaacgccggccggctggaatgcctg
tccgacgtgccgcgccatcccggcctgcattgcctgcttggctacgcatcgcgaggcctg
atctgggccccgctgatggcggaactgctggtctgccaactggaaaatacgccgccgccg
ctggagaacacactgatcgacgccctcgatcccggccgcttcctgctcaagcaacgccgc
cgcgcgcagtag
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