Duganella dendranthematis: HH213_15225
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Entry
HH213_15225 CDS
T06560
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dug
Duganella dendranthematis
Pathway
dug00550
Peptidoglycan biosynthesis
dug01100
Metabolic pathways
dug01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HH213_15225 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HH213_15225 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dug01011
]
HH213_15225 (mrdA)
Enzymes [BR:
dug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HH213_15225 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
dug01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HH213_15225 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QJD91307
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All DBs
Position
3345440..3347359
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AA seq
639 aa
AA seq
DB search
MTEFKDTEVEMREFRLRVTTLGGLVFLCFVLLLARFVWLQIVKHNDFAVKAEENRISLLP
IVPNRGLILDRNGVVLARNYSAYTLEITPSKLEAPLDDTIAELSKLVEVEVKDRRRFKKL
MDDSKGFESVPLRTHLTDEEVARFSAQHFRFPGVEVQARLFRQYPLGESASHVIGYIGRV
SRAEADALDDSDDAANYRGTDHIGKEGLEKSYEKLLHGQAGFEEVEKTSGGRAVRTLSRT
PAKAGSNLILSIDIELQKIVEEAFGDRRGALVAIEPETGDVLAFVSRPGYDPNLFVDGID
TQSWDELNTSADKPMVNRPLSGTYAPGSTFKPFMALAALELGKRTPSQVTYDPGYFMLGG
HRFNDDVAGGHGSVDMRKSIIVSCNTYYYSLGHDMGINAIHDFMQPFGFGQQTGIDLDNE
KTGALPSPEWKARRFKGAAGRWVGGDTISVSNGSGLNAYTPLQIAHAVANLANNGVVMKP
HLVKIVEDSTTHARKLTVAQQSYRIPLKQENIDFIKNAMVGVTSEPGGTAYRVFANAGYT
VGGKTGTAQVITIKKGEKYNAARLAERLRDNALFTAFAPVDKPRIVLAMVVENAGHGGEA
AAPIARKALDYYLLGKRPAEKDKNKVEKQDTENGDAPAT
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagttcaaagacaccgaagtcgagatgcgcgagttccgcctgcgcgtgacaacg
ctgggcgggctggtattcctgtgcttcgtgctgttgctggcgcgcttcgtctggctgcag
atcgtcaagcacaatgacttcgccgtgaaggcggaagagaaccgcatttcgctgctgcca
atagtgccgaatcgtggtctgattttggaccgcaacggcgtggtcctggcgcgcaactac
tcggcctatacgctggagattacgccgtccaagctggaagcgccgctggatgacactatt
gccgagctgtccaagctggtggaggttgaggtcaaagaccgccgccgcttcaagaagctg
atggacgactccaaaggttttgagagcgtgccgctacgcacccacctcaccgacgaagaa
gtcgcccgcttcagtgcgcagcacttccgctttcccggcgtcgaagtgcaggcgcgcctg
ttccgtcaatatccgctgggcgaaagcgcttcgcacgtcatcggctacatcggccgcgta
agccgtgccgaagccgatgcgctggacgacagcgacgatgccgccaactatcgcggcacc
gaccatatcggcaaagaggggctggagaaaagctacgagaagctattacatggccaggcc
ggcttcgaggaagtggagaagacgtccggcggccgcgccgtgcgcaccttgtcgcgcacg
ccggccaaggcgggcagcaacctgatactgtcgatcgacatcgaactgcaaaaaatcgtg
gaggaagctttcggcgaccgtcgcggcgcactggtggcgattgagccggaaaccggcgac
gtgctggccttcgtctcgcggcccggctacgatccgaacctgtttgtggacggcatcgac
acgcaaagctgggacgaattgaatacctcggcggacaaaccgatggtcaaccgcccgctg
tccggcacctacgcgccgggttccacctttaaaccattcatggcgctggcggcgctggaa
ctgggcaagcgcacgccgtcgcaggtgacctatgatcctggttacttcatgctgggtggg
catcgctttaacgacgacgtggcgggcgggcatggctcggtcgacatgcgcaagtccatc
atcgtgtcctgcaatacctactactactcgctcggtcatgacatgggcatcaacgccatc
cacgacttcatgcagccgtttggctttggccagcagaccggcatcgacctcgataacgaa
aagaccggcgcgctgccatcgccggagtggaaggccaggcgcttcaaaggtgcggcggga
cgctgggtcggtggtgatactatctcggtcagcaatggttcgggcctgaatgcttacacg
ccgttacagatcgcgcacgccgtggccaatctggcaaacaatggcgtggtgatgaagccg
cacctggtgaagatcgttgaagacagcacgacccacgcccgcaagttgacggtggcgcag
cagagctatcggattccgctcaagcaggaaaacatcgactttatcaagaacgcgatggtg
ggtgtgaccagcgagccgggtggcacggcgtatcgcgtatttgccaacgccggctacaca
gtgggcggcaagaccggcaccgcgcaggtcatcacgattaaaaaaggcgagaagtacaac
gccgccagactggccgaacgcctgcgcgacaatgcgctgttcaccgcttttgcgccggtg
gacaagccgcgcatcgtgctggccatggtggtggaaaacgcggggcatggtggcgaagcc
gccgcgccgatcgcgcgcaaagcgctggattattacctgctgggcaaacgtccggcggag
aaggacaagaacaaagtggaaaaacaagatacggagaacggcgatgcgcctgcaacgtaa
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