Duganella dendranthematis: HH213_15275
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Entry
HH213_15275 CDS
T06560
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
dug
Duganella dendranthematis
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dug03009
]
HH213_15275 (rsmB)
Enzymes [BR:
dug01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HH213_15275 (rsmB)
Ribosome biogenesis [BR:
dug03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HH213_15275 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
FtsJ
NusB
MTS
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
QJD91317
UniProt:
A0ABX6MBR6
LinkDB
All DBs
Position
3355240..3356646
Genome browser
AA seq
468 aa
AA seq
DB search
MNKRPTLSLKSAAKPAAPKMRASHARELKPALQTHFQTSLKPDALAYSLMGAANAIAQVR
TGTNLPLALGQVWGRLPEITPQARGAMQDISYRAMRQLGQSEALVGLMAPKAPEPLVSAL
LSCALALLASPDEPRPYEDFTVVDQTVTAAESHPDTARAKGMVNAVLRRFLRERQALLDA
VLLQPVAKWNYPQWWIDAAKTAWPQQWQAILATGNSAPPLTLRVNARQSTVEQYLARLAA
AGIGANQIGPYAVRLDKAVGVQLIPGFADGEVSVQDAGAQLAAPLLDVQDGMRVLDACAA
PGGKTCHILELADADVTALDADAKRLARVGENLQRLQLKATLQAADAQNKDWWDGQPYDR
ILADVPCTASGIVRRHPDIRWLRRKADTLQLATLSGKILDNLWQMLAPGGKLLFVTCSLW
PQESEAQAAAFAVRHQAVRLDAPGQLLPAGGSGQDHDGLFYALFQKNA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcgtccaacgctctccttgaagtctgccgccaagccggccgcgcccaaaatg
cgcgccagtcatgcgcgggagctgaaaccggcgttgcagacccacttccagaccagcctc
aagcccgacgccctggcctacagcctgatgggcgccgccaacgccatcgcccaggttcgc
accggcaccaacctgccgctggcgctgggccaggtatggggacgactgccggaaatcacg
ccgcaggcgcgcggcgcgatgcaggacatcagctaccgcgccatgcgccagctggggcag
agcgaggcgctggtgggcctcatggcgcccaaggcgccggagccgctggtgtcggccctg
ctgtcgtgcgcgctggcgctgctggcgtcgcccgatgagccgcgcccctacgaagatttc
accgtggtcgaccagaccgtgaccgccgccgagtcgcatccagacaccgcccgcgccaaa
ggcatggtcaacgccgtgctgcgccgcttcctgcgcgagcgccaggcgctgctggacgcg
gtgctgctgcaaccggtagcaaaatggaattatccgcaatggtggatcgacgccgccaag
accgcctggccgcagcaatggcaagccatcctggccaccggcaacagcgcgccgccgctg
acgctgcgcgtcaacgcccgccagagcacggtagaacaatacctggccaggctggcggcc
gccggcatcggcgccaaccagatcggcccttacgcggtgcggctggacaaggcggtcggc
gtgcagctgattcccggctttgccgacggcgaagtgtcggtgcaggacgccggcgcccag
ctggcggcgccgctgctggacgtgcaagacggcatgcgcgtgctggacgcctgcgccgcg
ccaggcggcaagacctgccacatcctggaactggccgacgccgacgtcaccgcgctggac
gccgatgccaagcgcctggcgcgggtcggcgagaacttgcaacgtttgcaactgaaggct
accttgcaggccgccgatgcccagaataaagactggtgggatggccagccgtacgaccgc
atcctggccgacgtgccgtgcaccgcctccggcatcgtgcgccgccatccggatattcgc
tggctgcgccgcaaggccgacacgctccaacttgcaacactttccggcaaaatcctcgac
aatctttggcagatgctggcaccgggtggtaaattgctattcgtgacatgttccttgtgg
ccgcaggaatccgaggcgcaggcggccgcttttgctgtacgacatcaggcggtacgactg
gatgcgcccggtcaattgctccccgccggtggctccgggcaggatcacgatggtttgttt
tacgcgttgttccagaaaaatgcgtaa
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