Duganella dendranthematis: HH213_15675
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Entry
HH213_15675 CDS
T06560
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
dug
Duganella dendranthematis
Pathway
dug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HH213_15675 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dug03400
]
HH213_15675 (ruvB)
Enzymes [BR:
dug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HH213_15675 (ruvB)
DNA repair and recombination proteins [BR:
dug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HH213_15675 (ruvB)
RecFOR pathway proteins
HH213_15675 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_22
AAA_16
Rad17
AAA_3
AAA_14
nSTAND3
DUF815
RNA_helicase
AAA_18
AAA_17
ABC_tran
AAA_28
NTPase_1
TsaE
AAA_33
NB-ARC
Sigma54_activ_2
bpMoxR
AAA_24
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
QJD91390
LinkDB
All DBs
Position
3437431..3438489
Genome browser
AA seq
352 aa
AA seq
DB search
MSIQTDSFTEQRIIDAAPSSPNEEAIERALRPKHLDEYVGQSKIRDQLEIFISAARNRKE
ALDHTLLFGPPGLGKTTLANIIAREMGVNLRQTSGPVLERPGDLAAILTNLEANDVLFID
EIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNPLRD
RFGIVARLEFYTTDELTKIVSRSAALLKAHIDEDGAREIARRARGTPRIANRLLRRVRDY
AEVKGNGEITKTVADAALVMLDVDTVGFDVMDRKLLEAVLYKFGGGPVGIGNLAAAIGEA
ADTIEDVLEPYLIQQGFLQRTPRGRVATPAAYKHFGMSPPRTNPNGELWSDL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagcatacagaccgacagttttaccgaacagcgcattatcgatgctgcgccgtcttcg
ccaaatgaagaggcgatcgaacgcgcgctgcggcccaagcatctcgatgaatatgtcggg
cagtccaagatccgcgaccagctggagatcttcatctccgccgcccgcaatcgtaaggag
gcgctcgaccatacgctgctgttcgggccgccaggcctgggtaaaaccacgctggccaac
atcatcgcccgcgagatgggcgtcaacctgcgccagacctccggcccggtgctggaacgc
cccggcgacctggccgccatcctgaccaacctggaagccaacgacgtcctgtttatcgac
gaaatccaccgcctgtcgccggtggtggaagagatcctgtacccggcgctggaggactac
cagatcgacatcatgatcggcgaaggcccggccgcgcgctcggtcaagctcgacctgcaa
ccgttcacgctggtcggcgccaccacccgcgccggcatgctgaccaacccgctgcgcgac
cgcttcggcatcgtcgcccggctggagttctataccaccgatgaactgaccaagatcgtc
agccgcagcgccgcgctgctgaaggcccacatcgacgaagacggcgcccgcgaaatcgct
cgccgcgcgcgcggcacgccgcggatcgccaaccgcctgctgcgccgcgtgcgcgactac
gccgaggtcaagggcaacggcgagatcaccaagaccgtggccgacgccgcgctggtgatg
ctggatgtcgacacggtcggcttcgacgtcatggaccgcaagctgctggaagcggtgctg
tacaaattcggcggcggcccggtcggcatcggcaacctggcggcggccatcggcgaagcg
gccgacaccatcgaagacgtgctggaaccgtacctgatccagcaaggcttcctgcagcgt
acgccacgcggccgggtcgcgacgccggccgcctacaagcatttcggcatgagcccgccg
cgcaccaatccgaatggcgaactgtggagcgatctgtaa
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