Duganella dendranthematis: HH213_15815
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Entry
HH213_15815 CDS
T06560
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dug
Duganella dendranthematis
Pathway
dug03420
Nucleotide excision repair
dug03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HH213_15815
03430 Mismatch repair
HH213_15815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dug03400
]
HH213_15815
Enzymes [BR:
dug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HH213_15815
DNA repair and recombination proteins [BR:
dug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HH213_15815
MMR (mismatch excision repair)
Other MMR factors
HH213_15815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QJD91417
LinkDB
All DBs
Position
3466577..3468877
Genome browser
AA seq
766 aa
AA seq
DB search
MQNLLHNLNEEQLAAVTLPAQSALILAGAGSGKTRVLTTRIAWLVQTGQVSPSGILAVTF
TNKAAKEMLTRLSAMLPINTRGMWIGTFHGLCNRLLRTHHRDAALPQTFQILDSQDQLSA
IKRLLKANNVDDEKFPPKEIMYFINGAKDQGLRADKIDPYNADERKKVELYQLYDDQCQR
EGVVDFAELLLRTYELLLRNQPLREHYQQRFQHILVDEFQDTNDLQYKWLKLLAGHGTQR
GGVVFAVGDDDQSIYAFRGANVGNMSAFEREFNVKNLIKLEQNYRSHGHILDAANILIAN
NSKRLGKNLRTDAGHGEQVRVYEANSDLSEASWIIEETKNLIHDGASRSEIAVLYRSNAQ
SRVIEHALFSAGIPYHVYGGLRYFQRAEVKHAIAYLQLMDNPHNDSAFLRVVNFPTRGIG
ARTLETLQAAAEQYRISLYAAVPYITGKAGTSLSGFVKLIEGVRFETQQMALPELVRIVL
EQSTLLTHYATEKEGADRIENLEQMVSAATQFLSEEGYGQGSPAHLGPQSQAQAGDAIIN
QDGIEILDADAPLSTVMSPLSAFLSHASLEAGDNQAAASQEAVQMMTVHSAKGLEFNNVF
ITGLEEGLFPHESSSREHDGVEEERRLMYVAITRARERLYLSFAQTRMLHGQTRYNMKSR
FFEELPEESLKWLTPKVQPNWFGAKKSAWDEAPLVGSDKALAQQISSKALAASTGWRLGQ
SVAHAKFGEGVIVNIEGSGNNARAQINFGSAGMKVLDLSIAKLEKI
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcttctccacaaccttaacgaggaacagctcgccgctgtcaccttgcccgcg
cagagcgccctgatcctggcgggcgccggttccggtaaaacccgtgtcctgaccacccgt
atcgcctggctggtccagaccggtcaagtgtcgccctccggtatcctggccgtgaccttt
accaataaggccgccaaggagatgctgacccgtctgtccgccatgttgccgattaatacg
cgcggcatgtggatcggcaccttccatggcctgtgcaaccgcctgctacgcacccaccat
cgcgacgccgccttgccgcagaccttccagatcctcgattcgcaggatcagctgtcggcc
atcaagcgcctgttgaaggccaataacgtcgatgacgagaagtttccgccgaaggagatc
atgtacttcatcaacggcgccaaggaccagggcctgcgcgccgacaagatcgatccctac
aacgccgacgagcgcaagaaggtcgagctgtaccagctgtacgacgatcaatgccagcgc
gaaggcgtggtcgatttcgccgaactgttgctgcgcacctatgaactgctgctgcgcaac
cagccgttgcgcgaacattatcagcagcgcttccagcacattctggtcgatgagtttcag
gataccaatgatctgcagtacaagtggttgaagctgctggcgggtcacggcacccagcgt
ggcggcgtggtgtttgccgtcggcgacgatgaccagtcgatttatgcgttccgtggcgcc
aacgtcggcaatatgagcgcgttcgagcgcgagttcaacgtcaagaatttgatcaagctg
gagcagaattaccgctcgcacggccacattctggacgcggccaacatcctgatcgccaat
aacagcaagcgcctgggcaagaatctgcgcaccgacgccggccacggcgagcaggtgcgc
gtctacgaagccaattcagacctgtccgaagcatcgtggattatcgaagaaaccaagaac
ctgatccatgacggcgcatcgcgtagcgagatcgccgtgctgtaccgctccaatgcgcag
tcgcgcgtgatcgagcatgcgctgttctcggccggcattccgtaccatgtgtacggcggc
ctgcgttacttccaacgcgccgaggtcaagcacgccatcgcgtatctgcaattgatggac
aacccgcacaacgattcggccttcttgcgcgtggtgaatttccccacgcgcgggatcggc
gcccgcacgctggagacgctgcaggccgctgccgagcagtaccgcatctcgctgtacgcc
gccgtgccgtacatcaccggcaaggcgggcacgtcgctgtcaggcttcgtcaaactgatc
gaaggcgtgcgctttgaaacgcagcagatggccttgccggaactggtgcgcatcgtactg
gaacaatccacgctgcttactcactacgccaccgaaaaagaaggcgccgaccgcatcgaa
aacttggagcagatggtcagcgccgccacccagttcctgtcggaagagggctacggccag
ggctcgccggcgcatctgggcccgcagtcgcaggcgcaggctggcgacgccatcatcaac
caggatggtatcgagatcctggatgcggatgcgccgctgtcgaccgtaatgtcgccgctg
tcggccttcctgtcgcacgcctcgctggaggccggcgacaaccaggccgccgctagccag
gaagcggtgcagatgatgacggtgcactcggccaaggggctggagttcaacaatgtcttc
atcaccggtctggaagagggcttgttcccgcacgagagcagttcgcgcgagcacgacggc
gtggaagaggaacgccgcctgatgtacgtggcgatcacgcgcgcgcgcgagcgtctgtac
ctgagcttcgcgcagacccgcatgttgcacggccagacccgctacaacatgaagtcgcgc
ttctttgaagagttgccggaagagtcgctgaagtggctgacgccgaaggtgcagccgaac
tggttcggcgccaagaagtcggcctgggacgaagcgccgttggtgggttcggacaaggcg
ctggcgcagcaaatttccagcaaggcgctggcggccagcaccggctggcggctgggccaa
tcggtggcccacgccaagttcggcgagggcgtgatcgtgaatatcgaaggcagcggcaat
aacgcccgcgctcagatcaacttcggcagcgccggcatgaaagtgctggacctgagcatc
gccaagctggagaaaatctag
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