Duganella dendranthematis: HH213_16355
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Entry
HH213_16355 CDS
T06560
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dug
Duganella dendranthematis
Pathway
dug00470
D-Amino acid metabolism
dug00550
Peptidoglycan biosynthesis
dug01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HH213_16355 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HH213_16355 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dug01011
]
HH213_16355 (murD)
Enzymes [BR:
dug01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HH213_16355 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dug01011
]
Precursor biosynthesis
Amino acid ligase
HH213_16355 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
QJD91515
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All DBs
Position
3581637..3583244
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AA seq
535 aa
AA seq
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MIYDGKNALVLGLGESGLAMALWLARSGARVRVADTRESPDRLPALRAAVPDAEFVAGPF
AASLLEGVDFVTVSPGLAPGRDLKEIAPAAAAAGIEVWGEIELFAQALEALKAERGYAPK
VIAITGTNGKTTVTTLVGQLCERAGKTVRVAGNISPAALDVLREVLDASPAPAAPAGQDA
SDAAPADDAVAPPAADAPSPTTQLPEVWVLELSSFQLQTTFTLEADAATVLNVTQDHLDW
HGDMPSYAAAKHRIFAANTVRVLNRDDATTMRMASATGHNVTFGTDAPVLRDDLGLNNER
GVLWLATAVPAEEEGEPKKRKKNDPPPPPVECIVKNLMPADALQIRGVHNAANALAALAL
CRAIDLPLAPLLHGLREYRGQPHRVELVSAINEVEYYDDSKGTNVGATVAALNGLGKAFT
GANQRLVVIMGGDGKGQDFAPLADPTAQFARAVLLIGRDAPQIRAALQNTGVALEDCGTD
LPQAVKRASELAQAGDAVLLSPACASMDMFKNYAHRAQVFIDTVRDIALDAGQEI
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgacggcaaaaacgcactggttttagggctgggagaatccggcctggcgatg
gcgctgtggcttgcccgcagcggcgcgcgcgtgcgcgtggccgatacgcgtgagtcgccg
gatcgccttcctgctttgcgtgccgccgtgccggatgcggaatttgtcgccggcccattt
gccgcgtcgctgctggaaggcgtggacttcgtcaccgtcagcccgggcctggcgccaggc
cgcgacttgaaagagattgcgccggccgccgctgccgccggcattgaagtgtggggcgag
atcgaactgttcgcgcaggcgctggaagcgctgaaggcggaacgcggctacgcgccgaaa
gtcatcgccatcaccggcaccaatggcaagaccactgtcaccacgctggtcggacagctg
tgcgagcgcgccggcaagaccgtgcgcgtggccggcaacatcagccccgctgcgctggac
gtgctgcgtgaagtgctggacgcctcgccagcgccggccgccccggccggccaggacgca
tccgatgccgcgccagccgacgacgccgtcgctccgcctgctgccgacgcgccatcgccc
accacgcagctgccggaagtctgggtactcgaactctcgtccttccaactgcagaccacc
ttcacgctggaagccgacgcggcgaccgtattgaacgtgacacaggatcacctggactgg
cacggcgacatgccatcgtacgccgccgccaagcaccgcatctttgccgccaataccgtg
cgcgtcctgaatcgcgacgacgccaccaccatgcgcatggccagcgccaccggccataac
gtcaccttcggcacggacgcgccagtcctgcgcgacgaccttggcctgaacaacgagcgc
ggcgtgctgtggctggccaccgccgttccggccgaagaagagggcgaaccgaagaagcgc
aaaaagaacgatcctccgccaccgccagtggaatgcatcgtcaagaacctgatgccggcc
gacgcgctgcaaatccgcggcgtccacaacgccgccaacgcgctggccgcgctggctctg
tgccgcgccatcgacctgccgctggcgccgctgctgcacggcctgcgcgaatatcgcggc
cagccgcatcgcgtggaactggtcagcgccatcaatgaagttgaatactacgacgacagc
aaaggcacaaacgtcggcgccaccgtggccgcactgaatggactgggcaaagccttcacc
ggcgccaaccagcgcctggtggtcatcatgggcggcgacggcaaaggccaggactttgcg
ccattggccgacccgaccgcgcagtttgcccgcgccgtgctgctgatcggccgcgacgcg
ccgcagattcgcgccgcgctgcaaaacaccggcgtcgcgctggaagactgcggcaccgac
ctgccgcaagccgtcaagcgcgccagcgaactggcgcaagccggcgacgccgtgctgctg
tcgccggcttgcgccagcatggatatgttcaagaactacgcgcatcgcgcccaggtgttc
atcgacaccgtgcgtgacatcgctctcgacgcgggacaggagatctga
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