Duganella dendranthematis: HH213_17710
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Entry
HH213_17710 CDS
T06560
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dug
Duganella dendranthematis
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dug03016
]
HH213_17710 (truB)
Enzymes [BR:
dug01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HH213_17710 (truB)
Transfer RNA biogenesis [BR:
dug03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HH213_17710 (truB)
Prokaryotic type
HH213_17710 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
ALTTAQ_rpt
Motif
Other DBs
NCBI-ProteinID:
QJD91763
LinkDB
All DBs
Position
3896584..3897510
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AA seq
308 aa
AA seq
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MNQARTKRVRDLVDGVLLLDKPVGFSSNDALIKAKRVLNAKKAGHTGTLDPFATGLLPLC
FGEATKFSQDLLEADKTYDTTVHLGQTTDTGDTEGEVIDTRDVNVTLEQIHAVLAQFRGP
IKQVPPMYSALKRDGKPLYEYAREGITLEREARDVTIHKLELIAYQAPFLKLSVTCSKGT
YIRVLGQDIGEALGCGAHLNALRRTQVGALTTEHMITLDELVAHETPLTLLSPVDALLSS
FPAVQLNAELAKRFLNGQRLALGKEPSVSVPAQQGRVRVYLDAKLLGTAILGEYSILQPE
RLIAFVAE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagcccgtaccaaacgcgtccgcgatctggtggacggcgtgctgctgctcgac
aaaccggtgggcttttccagcaacgatgcgctgatcaaggccaagcgcgtgctcaacgcc
aagaaggccggccacaccggcacgctcgatccgttcgccaccggcctgctgccgctgtgc
ttcggcgaggccaccaagttttcgcaggacctgctggaagccgacaagacctacgacacc
accgtgcacctgggccagaccaccgataccggcgacaccgaaggcgaagtgatcgacacg
cgcgacgtcaacgtcacgctggagcagatccacgccgtgctggcgcagttccgcggcccg
atcaagcaggtgccgccgatgtattcggcgctcaagcgcgacggcaagccgctgtacgaa
tacgcccgcgaaggcatcacgctggaacgcgaagcgcgcgacgtcaccatccataagctg
gaattgattgcgtatcaagcgccgttcctgaagctgtcggtcacctgcagcaagggcacc
tatatccgcgtgctgggccaggacatcggcgaagcgctcggctgcggcgcccatctgaac
gcgctgcgccgcacgcaagtcggcgcgctgaccaccgagcacatgattacgctggatgaa
ctggtcgcccacgaaacgccgctgacgctgctgtcgccggtcgacgcgctgctgtccagc
ttcccggcggtgcaactgaacgccgaactggccaagcgcttcctcaatggccagcgcctg
gcgctgggcaaggaaccgtcggtcagcgtgccggcccagcagggccgggtacgcgtgtac
ctggacgccaagctgctgggcacggccatcctcggcgaatacagcatcctgcagccggaa
cgattaatcgccttcgtcgccgaataa
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