Duganella dendranthematis: HH213_18300
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Entry
HH213_18300 CDS
T06560
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
dug
Duganella dendranthematis
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dug03000
]
HH213_18300
Transcription factors [BR:
dug03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HH213_18300
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QJD91870
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Position
4017182..4018138
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AA seq
318 aa
AA seq
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MHHVSFRQLQSLVLVARHESVSRAADAMHLTQPAVSLQLRTLEEITGMALTRKDGRNIQL
TAAGEVMADFSERILRLWEQATDELAALQGVTSGTLRIGAVTTAEHLLPPLLVPFTLKRP
DVRLKLQVGNRTEIINMLARHEIELAIMGTPPRELRTNAARFARHPMAFVASPSHPLMKK
KKITLNDVMAANLLVRERGSGTRTAVEKLLREEGHAAEFGSEVSSNEAIKRMVSAGLGVG
FLSVHACGLEFETGLLAMLPMAHNPVEADWHIMHLTDQPIPKVAASFQDFVIENGQELVR
KELESFYKQLRKRPAAYR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacgtcagttttcgccagttgcagtcgctggtcctggtggcgcggcacgagagc
gtgtcgcgcgcggcggacgccatgcacctcacgcagccggcggtctcgcttcaattgcgc
acgctggaagagatcaccggcatggcgctgacgcgcaaggacggccgcaacatccagctg
acggcggcgggggaggtgatggccgacttctccgagcgcatcctgcgtttgtgggagcag
gccacggacgaactggcggcgctgcagggcgtcacctccggtacgctgcgcatcggcgcg
gtgaccacggcggagcacctgctgccgccgttgctggtgccgttcacgctcaagcggccg
gacgtgcgcctcaagctccaggtgggcaaccgcacggagatcatcaacatgctggcgcgg
cacgagatcgaactggccatcatgggcacgccgccgcgcgagctgcgcaccaacgcggcc
cgcttcgcgcgccacccgatggcttttgtcgccagcccgtcgcatccattgatgaagaag
aaaaaaatcacgctcaacgacgtgatggcggcgaacctgctggtgcgtgaacgcggctcg
ggcacgcgcacggcggtggaaaagctgctgcgcgaggaaggccacgcggcggaattcggc
tccgaggtgtccagcaacgaggcaatcaagcgcatggtgtcggcagggctgggcgtcggc
ttcctgtcggtccacgcctgcggactggaattcgaaaccggcttgctggccatgctgccg
atggcgcacaatccggtggaagcggactggcatatcatgcacctgaccgaccagccgatt
cccaaggtggccgcctcgttccaggacttcgtcatcgaaaacggccaggagctggtgcgc
aaggaactggagagcttctacaagcagctgcgcaagcgtccggccgcgtaccggtaa
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