Duganella dendranthematis: HH213_19000
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Entry
HH213_19000 CDS
T06560
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dug
Duganella dendranthematis
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dug03032
]
HH213_19000 (gyrA)
03400 DNA repair and recombination proteins [BR:
dug03400
]
HH213_19000 (gyrA)
Enzymes [BR:
dug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HH213_19000 (gyrA)
DNA replication proteins [BR:
dug03032
]
Prokaryotic type
DNA Topoisomerases
HH213_19000 (gyrA)
DNA repair and recombination proteins [BR:
dug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HH213_19000 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QJD91998
UniProt:
A0ABX6MD04
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All DBs
Position
4148321..4150951
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AA seq
876 aa
AA seq
DB search
MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYSMHEMNNVWN
RPYVKCARVVGETMGKYHPHGDASIYDTLVRMAQHFSLRYMLVDGQGNFGSVDGDGAAAM
RYTECRLDKISSELLADIDKDTVDFQPNYDGKEKEPTVLPTRIPNLLINGSSGIAVGMAT
NIPPHNLHEVIAGALHVLNNPECSIDELIELIPAPDFPTGGTIYGVSGVRDGYRTGRGRV
VMRAKTHYEEYGKDGGRTAIIVDELPYQVNKKSLLERIAENVRDKKLEGISDIRDESDKS
GMRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLLNLKEMLSCFLSHRR
EVVTRRTVFELRKARERGHVLEGLAVALANIDDFIALIKAAPTPPVAKSALMDRSWDSSL
VREMLARTGEGTTVGGIEAFRPEHLPKHYGIQADGMYKLSDDQAQEILQMRLQRLTGLEQ
DKIVNEYKDVMAEIADLLDILATPSRVTTIITDEMTSIVGEFGDPTKDPRRSNIEHNASD
LNTEDLITPQDMVVTLSHTGYMKAQPISEYRAQKRGGRGKQAMATKDEDWIDQLFIANTH
DYILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLADNEKITVILPLSGENRTFPED
HYVFMSTSLGTVKKTPLKDFSNPRKAGIIAVDLDEGDFLIGAALTDGEHDVMLFSDAGKA
VRFDENDVRPMGRNARGVRGMNLDEGQRVIALLVAENEQQSVLTATENGFGKRTPITEYT
RHGRGTKGMIAIQTSERNGRVVAATLVEPTDEIMLITTGGVLIRTRVSEIREMGRATQGV
TLIAVEDGTKLSGLQRVVETDIDEVELEPGPDSATE
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgcaaaagaaacaatccctatttccctcgaagaagagatgcgcaagagc
tacctcgattacgccatgagcgtgatcgtgggccgcgccttgccggatgtgcgtgacggc
ctcaagcctgtacaccgccgcgtcctgtactcgatgcacgaaatgaacaacgtgtggaat
cgcccctatgtcaagtgcgcccgtgtggtgggcgagaccatgggtaagtatcacccgcac
ggcgacgcctcgatttacgacacgctggtgcgcatggcgcagcacttctcgctgcgctat
atgctggttgacggccagggtaacttcggctcggtcgatggcgacggcgcggcggcgatg
cgttacaccgagtgccgtctcgacaagatttccagcgaactgctggccgatatcgacaag
gacacggtcgacttccagcccaactacgacggcaaggaaaaagaaccgaccgtcctgccg
acccgcattcccaacctgctgatcaacggctcgtcgggtatcgccgtgggtatggccacc
aacatcccgccgcacaatctgcatgaagtgattgccggcgcgctgcacgtgctgaacaat
ccggaatgctcgatcgacgagctgatcgaactgatcccggcgccggacttcccgaccggc
ggcaccatttatggcgtctcgggcgtgcgcgacggttaccgcaccggccgtggccgcgtg
gtgatgcgcgccaagacccactacgaagagtacggcaaggacggcggccgcaccgccatc
atcgttgacgaactgccgtaccaggtcaacaagaaatcgctgctggaacgcatcgccgaa
aacgtccgcgacaagaagctggaaggcatcagcgacatccgcgacgagtccgataaatcg
ggcatgcgcgtggttatcgagctgaagcgtggtgaagtgccggaagtggtgctgaacaac
ctgtacaagcaaacccagctgcaagacacctttggcatgaacatggtggcgctggtcgat
ggccagcccaagctgctgaacctgaaggaaatgctgtcgtgcttcctgtcgcaccgccgc
gaagtggtcacccgccgcaccgtgttcgagctgcgcaaggcgcgcgaacgcggccacgtg
ctggaaggcctggcggtcgcgctggccaatatcgatgatttcatcgccctgatcaaggcc
gcgccaaccccgccggtggcgaaatcggcgctgatggaccgttcgtgggattcgtcgctg
gtgcgcgagatgctggcccggaccggcgaaggcaccaccgtcggcggtatcgaagcgttc
cgtccggaacatctgccgaagcactacggcatccaggccgacggtatgtacaagctgtcc
gacgaccaggcgcaagagattctgcaaatgcgcctgcaacgcctgactggcctggaacag
gacaagatcgtcaatgagtacaaggacgtgatggcggaaatcgccgacctgctggacatc
ctggccacgccgtcgcgcgtgaccaccatcatcaccgacgaaatgacgtcgatcgtgggc
gaattcggcgatccgaccaaggacccgcgccgttccaacatcgagcacaacgccagcgac
ctgaacacggaagacctgatcacgccgcaggacatggtggtgaccctgtcgcacaccggc
tacatgaaggcgcagccgatctccgagtaccgtgcgcagaaacgcggcggtcgcggcaag
caggccatggccaccaaggacgaggactggatcgaccagctgttcatcgccaacacgcac
gattacatcctgtgcttctccaaccgcggccgcctgtactggctgaaggtgtgggaagtg
ccgcaaggctcgcgcaactcgcgtggcaagccgatcgtcaacatgttcccattggcggac
aacgagaagatcaccgtgattctgccgctgtcgggcgagaaccgcaccttcccggaagac
cactacgtcttcatgtccaccagcctgggcaccgtgaagaaaacgccgctgaaagacttc
agcaatccacgcaaggccggcatcatcgcggtcgacctggacgagggtgatttcctgatc
ggcgccgcgctgaccgatggcgagcacgatgtgatgctgttctccgacgccggcaaggcc
gtacgcttcgacgagaacgacgtgcgtccgatgggccgtaacgcccgcggcgtgcgtggc
atgaacctcgacgaaggccagcgcgtgattgcgctgctggtagccgagaacgagcagcag
tcggtgctgaccgccaccgagaacggcttcggcaagcgtaccccgatcaccgagtacacc
cgtcatggccgcggcaccaagggcatgatcgcgattcagacctccgaacggaatggtcgc
gtggtggcggcaacgctggtggaaccgaccgatgagatcatgctgatcaccaccggcggc
gtcctgatccgcacccgcgtatcggagatccgcgagatgggccgcgcgacccagggtgtg
accctgatcgcggtggaagacggcaccaagctgtccggcctgcagcgcgtggtcgagacg
gacatcgacgaagtcgagctggaaccaggcccggattcagcgacggagtaa
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