Duganella dendranthematis: HH213_19580
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Entry
HH213_19580 CDS
T06560
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
dug
Duganella dendranthematis
Pathway
dug00521
Streptomycin biosynthesis
dug00523
Polyketide sugar unit biosynthesis
dug00541
Biosynthesis of various nucleotide sugars
dug01100
Metabolic pathways
dug01110
Biosynthesis of secondary metabolites
dug01250
Biosynthesis of nucleotide sugars
Module
dug_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HH213_19580 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HH213_19580 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HH213_19580 (rfbC)
Enzymes [BR:
dug01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HH213_19580 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QJD92102
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All DBs
Position
complement(4281586..4282134)
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AA seq
182 aa
AA seq
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MNVIKTPLEGLLVLEPKVFGDDRGFFFESFNAKRFGELTGFTGEFVQDNHSRSSKGVLRG
LHYQIQQAQGKLVRATAGSVFDVAVDIRKSSPTFGQWFGIELSAENKRQVWIPPGFAHGF
VVTSDSAEFLYKTTDYWAPEHERAILWNDPAIGIDWPALEAAPLLSGKDQAASLLANAEV
FA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgattaagacgccactggaaggcctgctggtgctggagccgaaggtttttggc
gatgaccgtggttttttctttgagagtttcaacgccaagcgttttggtgagctgaccggc
tttaccggtgaattcgtgcaggacaaccactcgcgctcgtccaaaggcgtgctgcgcggc
ctgcactatcagatccagcaagcccagggcaagctggtgcgcgccaccgccggctcggtg
tttgatgtcgccgtcgatatccgcaagagctcgccgaccttcggccagtggttcggcatt
gaactgtcggccgagaacaagcgccaggtgtggataccgcccggcttcgcgcacggcttt
gtggtgacgtccgattccgccgagttcctgtacaagaccaccgactactgggcgcctgag
catgagcgcgccatcctgtggaacgacccggcgatcggcatcgactggccggcgctggaa
gcggcgccgctgctgtccggcaaggaccaggcggcctcgctgctggccaacgccgaggtg
ttcgcatga
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