Duganella dendranthematis: HH213_23720
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Entry
HH213_23720 CDS
T06560
Name
(GenBank) PLP-dependent transferase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
dug
Duganella dendranthematis
Pathway
dug00260
Glycine, serine and threonine metabolism
dug00270
Cysteine and methionine metabolism
dug00450
Selenocompound metabolism
dug00670
One carbon pool by folate
dug01100
Metabolic pathways
dug01110
Biosynthesis of secondary metabolites
dug01230
Biosynthesis of amino acids
Module
dug_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HH213_23720
00270 Cysteine and methionine metabolism
HH213_23720
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HH213_23720
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HH213_23720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dug04147
]
HH213_23720
Enzymes [BR:
dug01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
HH213_23720
Exosome [BR:
dug04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
HH213_23720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QJD92827
UniProt:
A0ABX6MET1
LinkDB
All DBs
Position
complement(5149246..5150430)
Genome browser
AA seq
394 aa
AA seq
DB search
MSDKPSNHKAALATRVIHAGQSPDPSTGAIMPPIYATSTFVQESPGVHKGLDYGRSHNPT
RWALERCVADLESGAQGFAFASGLAAISTVLELADAGSHIIAGDDMYGGTYRLFERVRRR
SAGHQFTYVDLTNPENLLAAIKPETKMVWVETPTNPMLKLADLQAIAKICRERGIIAIAD
NTFASPIVQRPLEHGFDIVVHSTTKYLNGHSDIIGGIAVVGGEERQKEWREQLAFLQNSV
GAIAGPFDSFLALRGVKTLAIRMERHCASALELARWLEQQPEVRKVFYPGLESHPQHELA
KRQMQGFGGIISIDLNTDLPGARRFLESCEVFALAESLGGVESLIEHPALMTHASIPAPQ
RAALGIGDGLIRLSVGIEDLEDLRADIRRSLDAI
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacaaaccgagcaaccacaaagccgccctggccacccgcgtgatccacgccggc
caatcgcccgacccatcgaccggcgccatcatgccgccgatttacgccacctccaccttt
gtgcaggaaagccctggcgtgcacaagggcctggactacggccgctcgcacaatcccacc
cgctgggcgctggaacgctgcgtggccgacctggaaagcggcgcgcaaggtttcgccttc
gcctccggcctggcggcgatatcgacggtgctggagctggccgatgccggctcccacatc
atcgctggcgacgatatgtatggcggcacctaccgcctgttcgagcgcgtgcgccgccgc
agcgccggtcaccagttcacctacgtcgacctgaccaatcccgagaacctgctggccgcc
atcaagcccgagaccaaaatggtatgggtagaaacgccgactaacccgatgctcaagctg
gccgatttgcaggccatcgccaagatctgccgcgagcgcggcatcatcgccatcgccgac
aacaccttcgccagcccgatcgtccaacgtccgctggaacatggctttgacatcgtggtg
cattcgaccaccaagtatttgaacggccactccgacatcatcggcggcatcgccgtagtg
ggcggcgaggaacgccagaaggaatggcgcgagcagctggccttcctgcaaaactcggtc
ggcgcgattgccggcccgttcgacagcttcctggcgctgcgcggcgtgaagacgctggcg
atccgcatggagcgccactgcgccagcgcactggaactggcgcgctggctcgagcagcag
ccggaggtgcgcaaggtgttctatccgggactggagtcgcatccgcagcacgaactggcc
aagcgccagatgcagggcttcggcggcattatctcgatcgacctgaacaccgacctgccg
ggcgcgcgccgtttcctggaaagctgcgaagtatttgcgctggccgaaagcctgggcggc
gtcgaaagcctgatcgaacatccggcgctgatgacgcatgcgtccatcccggcgccgcag
cgggcggcactgggcatcggcgatggtttgatccgcctgtcggtgggaattgaagattta
gaggatttaagggccgatattcgtcgttcgctcgacgctatttaa
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