Duganella dendranthematis: HH213_24230
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Entry
HH213_24230 CDS
T06560
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dug
Duganella dendranthematis
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dug03009
]
HH213_24230 (rimO)
Enzymes [BR:
dug01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HH213_24230 (rimO)
Ribosome biogenesis [BR:
dug03009
]
Prokaryotic type
ribosomal protein modification factors
HH213_24230 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QJD92921
LinkDB
All DBs
Position
5268848..5270239
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AA seq
463 aa
AA seq
DB search
MQSQPLSRFPQPAAGAPAPKVGFVSLGCPKALVDSEQILTQLRAEGYETAKSYAGADLVI
VNTCGFIDAAVQESLDAIGEALAENGKVIVTGCLGAKKDAAGDDIITKVHPKVLAVTGPH
ALAEVMDSVHLHLPKPHEPFIDLIPAQGIKLTPKHYAYLKISEGCNHRCSFCIIPSMRGD
LVSRPIGELLLEAENLFKSGVKELLVISQDTSAYGVDVKFRTGFWNGRPIKTHMTQLMEA
LGELAKSYGAWVRMHYVYPYPHVDQVIPLMGEHILPYLDIPMQHAHPDVLKRMKRPASGE
KNLDRILAWRKMNPDLTIRSTFIAGFPGETEEEFEYLLDFLKEAQIDRLGCFAYSPVEGA
TANELANPVPEEVREERRGRVMLLQEEISKARLKAKVGKTVRVLIDEVNRTGGVGRSAAD
APEIDGVVYVKPPYEPHKKLAVGQFVDVKITTSDAHDLWGEAL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgcaaccactctcccgttttccccagccagccgccggcgcgccagcaccgaaa
gtgggctttgtatcgctcggctgccctaaagcgctggtcgactccgaacagatcctgacc
cagctgcgtgctgagggttacgagaccgccaagtcctacgccggcgccgatctggtaatc
gtcaacacctgcggcttcatcgacgccgccgtgcaggaatcgctggacgccatcggcgaa
gcgctggccgaaaacggcaaggtgattgtcaccggctgcctgggcgccaagaaggacgcc
gccggcgacgacatcatcaccaaagtccacccgaaggtgctggccgtcaccggcccgcac
gcgctagctgaagtgatggattcggtccacctgcacctgcctaaaccgcacgagccgttc
atcgacctgattccggcgcagggcatcaagctgacgccgaagcattacgcctacctgaaa
atctcggaaggctgtaaccaccgctgctcgttctgcatcattccatcgatgcgcggcgac
ctggtgtcgcgtcctatcggcgaactgctgctggaagcggaaaacctgttcaagtcgggc
gtcaaggaactgctggtgatctcgcaggatacctcggcctacggcgtcgacgtcaagttc
cgtaccggcttctggaacggccgtccgatcaagacccacatgacgcagctgatggaagcg
ctgggcgaactggccaagtcctacggcgcctgggtgcgcatgcactacgtatatccatac
ccgcacgtcgaccaggtgatcccgctgatgggcgaacacattctgccgtatctggacatt
ccgatgcagcacgcgcatcccgatgtgctgaagcgcatgaagcgtccggccagcggcgag
aaaaacctggaccgcatcctggcctggcgcaaaatgaatccggacctgaccatccgctcg
accttcatcgccggcttccctggcgagacggaagaggaattcgaatacctgctggacttc
ctgaaggaagcgcagatcgaccgcctgggctgcttcgcctactcgccggtggaaggcgcc
accgccaacgaactggccaatccggtgccggaagaagtgcgcgaagagcgccgcggccgc
gtgatgctgctgcaggaagaaatctcgaaagcgcgcctgaaagcgaaagtcggcaagacc
gtgcgcgtgctgatcgatgaagtcaaccgtaccggtggcgtgggccgctcggctgccgac
gcgccggaaatcgacggcgtggtgtacgtcaagccgccgtacgaaccgcacaagaagctg
gccgtcggccagttcgtcgatgtgaaaatcaccacgtccgacgcgcatgatttgtggggc
gaggcgctttaa
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