Duganella dendranthematis: HH213_24360
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Entry
HH213_24360 CDS
T06560
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dug
Duganella dendranthematis
Pathway
dug00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HH213_24360 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dug01007
]
HH213_24360 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dug03016
]
HH213_24360 (lysS)
Enzymes [BR:
dug01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HH213_24360 (lysS)
Amino acid related enzymes [BR:
dug01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HH213_24360 (lysS)
Transfer RNA biogenesis [BR:
dug03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HH213_24360 (lysS)
Prokaryotic type
Other AARSs
HH213_24360 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QJD92945
UniProt:
A0ABX6MFB5
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All DBs
Position
complement(5302118..5303647)
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AA seq
509 aa
AA seq
DB search
MTTDLQDQAAAPDENKIIAERRAKLAAIREQGIAFPNDFKPEHKAADLHAQFGEKTREEL
EAAPVTVKLAGRMMLKREAGKKAAFATLQDSSGAKADGRIQIYATLDLTGEAAMAALHHY
DLGDILGVVGTLFKTKTDELTIKVTELRLITKSLRPLPDKFHGLADQETKYRQRYVDLIM
NEETRRTFKARTAAISSMRRFMEKNEFMEVETPMLHAIPGGAAAKPFITHHNALDMQMFL
RIAPELYLKRLVVGGFDRVFEINRNFRNEGVSIRHNPEFTMMEFYAAYTDYKWIMNFTEE
IIRQAAIDAHGTATLTYGGRELDLAKPFHRLTIVEAINKFAPGYTPEQLGDAEFIKKELL
KFGVKPFATAGLGALQLALFEETAEAQLWEPTFIIDYPAEVSPLARASDTAAGITERFEL
FMVGREIANGFSELNDAEDQSARFLAQVAAKDAGDEEAMFYDADYIRALEYGMPPAGGCG
IGIDRLMMIITDSPNIRDVLLFPHLRREE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgactacggatcttcaagaccaagcagccgctcctgacgagaacaaaatcattgcggag
cgccgcgccaagctggccgccatccgcgagcaaggcatcgccttcccgaacgacttcaaa
ccggaacacaaggctgccgacctgcacgcgcagttcggcgagaagacgcgcgaagagctg
gaagcggcgccggtcaccgtcaagctggccggccgcatgatgctgaagcgcgaagccggc
aagaaagccgctttcgccacgctgcaggattcgtcgggcgccaaggctgatggccgcatc
cagatctacgccacgctggacctgaccggcgaagccgccatggccgcgctgcaccactat
gacctgggcgatatcctgggcgtggtcggcacgctgttcaagaccaagaccgacgagctg
accatcaaggtcaccgaactgcgtctgatcaccaagtcgctgcgcccgctgccggacaag
ttccacggcctggccgaccaggaaaccaagtaccgccagcgctacgtggacctgatcatg
aacgaagagacgcgccgcaccttcaaggcgcgtaccgccgcgatttcgtcgatgcgccgt
ttcatggaaaagaacgagttcatggaagtggaaacgccgatgctgcacgccattccaggc
ggcgcggcggccaagccgttcatcacccaccacaatgcgctggacatgcagatgttcctg
cgcatcgcgccggagctgtacctgaagcgtttggtggtcggcggctttgaccgcgtgttc
gagatcaaccgtaacttccgcaacgaaggcgtgtcgatccgtcacaacccggaattcacg
atgatggaattctacgcggcgtacaccgactataagtggatcatgaacttcaccgaagag
atcatccgccaggcggcgatcgacgcgcacggcaccgcaacgctgacctacggcgggcgc
gagctggatctggccaagccgttccaccgcctgaccatcgtggaagcgatcaacaagttc
gcgccgggctatacgccggagcagctgggcgatgcggagttcatcaagaaggaactgctg
aagttcggcgtcaagccgttcgccaccgccggtctgggcgcgctgcaactggcgctgttc
gaggaaaccgccgaggcgcagctgtgggaaccgacctttatcatcgactatccggccgaa
gtgtcgccgctggcgcgcgcgtccgataccgccgccggcatcaccgagcgcttcgagctg
ttcatggtgggccgcgagatcgccaacggcttctcggagctgaacgatgcggaagaccag
tcggcgcgcttcctggcgcaagtcgctgccaaggacgcgggcgatgaagaggcgatgttc
tacgacgccgactacatccgcgcgctggaatacggcatgccgccagccggcggttgcggc
atcggcatcgatcgtctgatgatgatcatcaccgactcgccaaacatccgcgacgtgctg
ctgttcccgcacctgcgccgcgaagagtaa
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