Duganella dendranthematis: HH213_25160
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Entry
HH213_25160 CDS
T06560
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18302
membrane fusion protein, multidrug efflux system
Organism
dug
Duganella dendranthematis
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dug02000
]
HH213_25160
01504 Antimicrobial resistance genes [BR:
dug01504
]
HH213_25160
Transporters [BR:
dug02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HH213_25160
Antimicrobial resistance genes [BR:
dug01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
HH213_25160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QJD94284
LinkDB
All DBs
Position
5493342..5494412
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AA seq
356 aa
AA seq
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MLVATSALVLLGACSKHEEKTEDIRPVRAMLLASSDIDVNAEFSGEVRARVESRLGFRVG
GKIVNRKVDVGTLVKKGQVLMQLDPQDLQLSQAQALANLRAAETNRDLAKADLKRYQELV
SKSFVSQSVLDGKDSTFKAAQANVDASQAAYRGQSNQAAYAALVSDVDGVVTEVDAEIGQ
VVAAGTPVVRVAKAGEKEIVIGLPEDKVDVLRRVADVQVRLWADPKNTVPGKIREISPVA
DPSTRTYTVKVSIPDSLAEAKLGMTAVVQFASKTPTPQIKVPLTALFHEKSQTSVWLVEQ
GAVKLVPVSIGGVAGNDIVLASGVKPGQTVVTAGVNLLKPGQKVTILGNDLPKAAK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcgccacctcggcgctggtgctgcttggggcctgctcaaagcacgaggagaaa
accgaagacatccgcccggtgcgcgccatgctgctcgcaagcagcgacattgacgtgaat
gccgagttttccggcgaagtgcgggcgcgggtggaatcgcgcctcggcttccgcgtcggt
ggcaagatcgtcaaccgcaaggtggacgttggcacgctggtgaaaaaaggccaggtgctg
atgcagcttgacccgcaggacttgcagttgtcgcaagcccaggcgctggccaatctgcgc
gccgctgaaaccaaccgcgacttggccaaggccgatctcaaacgctaccaggaactggtc
agcaagagtttcgtcagccaatccgttctggatggcaaagactcgaccttcaaggcggcg
caggccaatgtggatgcatcgcaggcggcgtatcgcggccagtccaaccaagcggcctac
gcggcattggtgtcggatgttgacggcgtggtgacggaagtcgacgccgaaatcggccag
gtggtggcggccggcacgccggtggtgcgggtggccaaggcgggcgagaaggaaatcgtc
atcggtttgccagaggacaaggtcgacgtgctgcgccgcgtggcggacgtgcaggtgcgt
ctgtgggccgatccgaaaaacaccgtgcccggcaagatccgcgaaatttcgccggtggcc
gatccctcgacccgcacctacaccgtcaaagtgtcgattcccgattcgctggccgaggcc
aagctgggcatgaccgccgtggtgcagtttgcctccaagacgccgacgccacagatcaag
gtgccgctgacggcgctgttccacgaaaaatcgcagacttctgtctggctggtggagcag
ggcgccgtcaagctggtgccggtgagcattggcggcgtggccggcaacgatatcgtgctg
gccagcggcgtcaagccgggccagaccgtggtaacagccggcgtcaacctgctgaagccg
ggccagaaagtgaccatcctcggcaatgacctgccaaaggcggccaaatga
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