Duganella dendranthematis: HH213_25700
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Entry
HH213_25700 CDS
T06560
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
dug
Duganella dendranthematis
Pathway
dug02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HH213_25700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dug03021
]
HH213_25700
Transcription machinery [BR:
dug03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HH213_25700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
PhyR_sigma-like
GerE
Motif
Other DBs
NCBI-ProteinID:
QJD93179
UniProt:
A0ABX6MFQ4
LinkDB
All DBs
Position
complement(5619169..5619687)
Genome browser
AA seq
172 aa
AA seq
DB search
MTVAASSIKHPHFTALYNQHHSWLQRWLCVTLGNASDADDLAQDTFTRILGRADLAALHE
PRAFLTTVAKGVLVNWYQRQALERAYLEALAALPEPTTISPEQRLLILETLHVIDAMLDA
LPPKVKQAFLMAQLDGMGYADIAAHLDLSLITIKRYMKQAFLQCLLAMEDMP
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcgccgcttcctcgatcaagcatccgcacttcaccgccctgtacaaccagcac
cattcctggctacagcgctggctatgcgtcacgctgggcaacgccagcgatgcggacgat
ctggctcaagatactttcacccgcattctcggccgcgccgatctggccgcgctgcacgaa
ccgcgcgccttcctcaccacggtagccaaaggtgtcctggtcaactggtatcagcgccag
gcgctggaacgcgcctatctggaagcgctagccgccctgcccgagcccacaaccatttcg
ccggaacagcgcctgctaatcctcgaaacgctgcacgtcatcgacgccatgctggacgcg
ctgccgcccaaggtcaagcaagccttcctgatggcgcagctggacggcatgggctacgcc
gacatcgccgcgcatctcgacctgtcgctcatcaccatcaagcgctatatgaaacaggcc
ttcctgcaatgcctgctggcgatggaggacatgccgtga
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