Duganella dendranthematis: HH213_27485
Help
Entry
HH213_27485 CDS
T06560
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dug
Duganella dendranthematis
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dug03032
]
HH213_27485
03400 DNA repair and recombination proteins [BR:
dug03400
]
HH213_27485
Enzymes [BR:
dug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HH213_27485
DNA replication proteins [BR:
dug03032
]
Prokaryotic type
DNA Topoisomerases
HH213_27485
DNA repair and recombination proteins [BR:
dug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HH213_27485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF3656
Motif
Other DBs
NCBI-ProteinID:
QJD93496
LinkDB
All DBs
Position
6007731..6008807
Genome browser
AA seq
358 aa
AA seq
DB search
MKRDDIPAADLAPADAARAAGLRYVHDGQPGIVRKARGKQFRYLDSDGHAVTDEATLARI
KSLVIPPAWVDVWICKQPLGHLQATGRDARGRKQYRYHPRWRAHRDDAKYGRMLSFGKAL
PAVRRAVDEALRKPGLPREKVLATIVYLLEATLMRIGNEEYARENKSFGLTTLRDRHVRL
DGGKVQFRFRGKSGVHHAVEVQDRRLARIIARIRDLPGQELFQYEDDDGNPHAIDSADVN
DYLHAITGADYTAKDFRTWAGTVLAAVALKEYEKYDSEAQAKKNVVQAIESVSKKLGNTP
TICRKCYVHPAVIESYLDGSMLDALRRRAQQELKEDLHALRPEEAAVLALLQQRLKAG
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgatgacattccagccgccgacctggcgcccgccgacgccgcccgcgccgcc
ggcctgcggtatgtgcacgacggccagccgggcattgtgcgcaaggcgcgcggcaaacag
ttccgctatctcgacagcgacggccacgccgtcaccgacgaggccacgctggcccgcatc
aagtcgctggtgattccgccggcatgggtcgatgtctggatttgcaagcagccgctgggc
cacctgcaagccaccggccgcgatgcgcgcggccgcaagcaataccgctaccatccgcgc
tggcgcgcacaccgtgacgacgccaagtacgggcgcatgctcagcttcggcaaggcccta
ccggcggtgcgcagagcggtcgatgaagccttgcgcaaacctggcctgccgcgcgagaag
gtgctggccaccatcgtctacctgctggaggcgacgctgatgcggatcgggaacgaggag
tacgcgcgcgagaacaagtccttcggcctgaccacgctgcgcgaccgccatgtgcggctg
gacggcggcaaggtgcagttccgcttccgtggcaagagcggcgtgcatcacgcggtggag
gtgcaagaccgccggctggcgcgcatcatcgcccgcatccgcgacctgccgggccaggag
ctgttccagtatgaggacgacgacggcaatccgcacgccatcgattcggccgacgtcaac
gactacctgcacgccatcaccggcgccgattacacggccaaggacttccgcacctgggcc
ggcaccgtgctggcggcagtggcgctgaaagagtatgaaaaatacgactccgaagcccag
gccaagaaaaacgtggtgcaggcgattgagtcggtctccaaaaaactcggcaacacgccc
accatctgccgcaagtgctatgtgcatccggccgtgatcgagtcctacctcgacggcagc
atgctggacgccctgcgccgccgcgcgcaacaggaactcaaggaagacctgcatgcgctg
cgaccggaggaagcggcggtcctggcgttgctgcaacagcggctgaaagctggctga
DBGET
integrated database retrieval system
