Duganella dendranthematis: HH213_28340
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Entry
HH213_28340 CDS
T06560
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dug
Duganella dendranthematis
Pathway
dug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HH213_28340 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dug03400
]
HH213_28340 (recC)
Enzymes [BR:
dug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HH213_28340 (recC)
DNA repair and recombination proteins [BR:
dug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HH213_28340 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QJD93651
LinkDB
All DBs
Position
complement(6186967..6190392)
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AA seq
1141 aa
AA seq
DB search
MHSGITPGLLILHGNQMEQLRAAVFQWLRNHPLGALESEIFLVQSNGVAEWLKIALAEEI
GICAASRVALPARFLWDAYRGMLGRDRVPPISAFDKGPLTWRLMRLLPTLLADPVFAPLR
HFLSDGEAERRLQLAERLADLFDQYQVYRADWLDDWAAGRDQLRSARGDVTPLPEDQRWQ
GQLWRAVIADVEPHERDLGRATVHTEFVRASAAGEEPLGRLPRRVVIFGVSALPFQTLQA
LASIARYTQVLLAVPNPCQYYWGDIIEGRDLLRSAHRRQQLRNGQDLGQIPLEELHAHSH
PLLASWGRQGRDFVRMLDEFDEAAQASAAENDDVAPMRVDLFSDGDGDTLLTQVQAAVRE
MLPLSEHPHVPPAEDDRSIEFHVTHSVQREVEVLHDQLLQMFADAEYSGRPLRPRDVVVM
VPDIDTFSAAIHAVFAQHRRSDARYIPFEIGDVNDRSVNPLLVALEWLLRLPQQRCRQSE
VRDLLDVPALAGRFGLHDDDLPTLGRWIEGSGVRWGLDQQHRNGLGLGPAGEQNAWIFGV
RRMLLGYASGAGDSFAGIEPYGEIGGLDAALAGSLAQLVEALLHWRAVLAQSRSPVEWGV
QARALLATFFNTKEETDRLTLAQLDDALKKWLDTCEGASYDESVPLAVLREAWLGLMDEP
TLNHQFVSGGVTFCTLMPMRAVPFRVVCLLGMNDGDFPRRAPKADFDLLAQPGMARPGDR
SRRDDDRYLMLEAVLAARDKLYISWVGRNVRDNSEQPPSVLVSQLRDYLINGWDMSKEDM
HARTTEHALQPFSRRYFEAGGLLTYAREWREAHGEEIAEDEATELPPFDIDDKFRLKLGS
LHNFLRQPVRFFFRQRLGVMFGEAALVGEDEEPFSLNALERYLLEDTLLDDAETPEEIDQ
VYDKLTQRAERLAREGVLPIGLIGQQYQHQLVQALVPVRCAWLTLRQHYELAAPKVALNL
VLAGVPLDDWIDQLRSNGSETVWLAQMSSRVADKQGKPRGDKLIAMWLRQLAISAAGMQV
TGHLVARDAIVTMQPLDPEQAMEALRELVCLWRDGMNRPLPTACKTALALVQEGDPRAVY
DGGFDIGGENEDLCLKRMWPDFSALSAEPDFDDVSRALYGPLADWMEQCITIEKIEGEDA
A
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgcactctggcatcacccccggcctgctgattttgcacggcaatcagatggaacagttg
cgcgccgccgtcttccaatggctgcgtaaccacccgctcggggcgctggagtcggaaatc
ttcctggtgcagtccaacggcgtggccgaatggctgaagatcgcgctggccgaggaaatc
ggcatctgcgccgcctcgcgcgtggcgctgccggcgcgcttcctgtgggacgcttaccgg
ggcatgttggggcgcgaccgcgtgccgcccatctccgctttcgacaaaggtccgttgacg
tggcgcttgatgcgtctcctgcctacgctgctggccgatcctgtattcgcgccgctgcgc
cacttcctgtccgatggcgaagccgaacgccggctgcaactggccgaacggctggccgac
ttgttcgaccaataccaggtctatcgcgccgattggctggatgactgggccgcaggccgt
gaccagctgcgcagcgcgcgcggcgatgtcacgccgctgccggaagaccagcgctggcaa
ggccagttgtggcgcgccgtgatcgccgacgtcgagccgcatgagcgcgaccttggccgc
gccaccgtccacaccgaattcgtgcgcgccagcgccgctggtgaagaaccgctgggccga
ctgccgcgccgcgtggtgatctttggcgtctcggcgctgccgttccagaccttgcaggcg
ctggcctccatcgcccgctacacgcaggtgctgctggccgtgcccaatccatgccagtac
tactggggcgacatcatcgaaggccgcgatctgctgcgcagcgcgcaccgccgccagcaa
ctgcgtaatgggcaggacctgggccagattccgctggaagaactgcatgcgcacagccat
ccgctgctggccagctggggacgccaaggccgcgacttcgtgcgtatgctggacgaattt
gacgaagccgcgcaagccagtgcggcagaaaacgacgatgtggcgccaatgcgggtcgac
ctgtttagcgacggcgacggcgacaccttgctgacgcaggtgcaggccgccgtgcgcgag
atgttgccgctgtccgagcatccccacgttccgccggcggaggacgaccgctcgatcgaa
ttccatgtcacccacagcgtgcagcgtgaagtggaagtgctgcacgaccagttgttgcag
atgttcgccgacgcggaatatagcggccggccgctgcgtccgcgtgatgtggtggtcatg
gtgccggatatcgacaccttctcggccgccatccacgccgtcttcgcccagcaccgccgc
agcgatgcgcgctacatcccgttcgagatcggcgatgtcaatgaccgcagtgtcaatcca
ctgctggtggcgctggagtggctgctgcgattgccgcagcagcgctgccgccagagcgaa
gtgcgcgacctgctggacgtgccggcgctggccggacgtttcggcctgcacgacgatgac
ctgccgacactgggccgctggatcgaaggctcgggcgtccgttggggcctggatcagcag
caccgcaatggtttgggactcggtcctgccggagagcagaatgcctggatcttcggcgtt
cgccgcatgctgctgggctacgccagcggcgccggagatagctttgccggtatcgagcca
tatggcgaaatcggcggcctggatgctgcgctggccggatcgctggcgcagctggtggaa
gcgctgctgcactggcgcgccgtgttggcccaatcgcgttcgccggtcgagtggggcgtg
caggcgcgcgcgctgctggccaccttcttcaacaccaaggaagaaaccgaccgcctgacg
ctggcgcagctggacgacgccctgaaaaaatggctggacacctgcgaaggcgcgtcctac
gacgaatccgtgccgctggccgtgctgcgcgaagcctggctcggactgatggacgagccg
acgttgaatcaccaattcgtctccggcggcgtgaccttttgcacgctgatgccgatgcgc
gccgtgccgttccgcgtggtctgcctgctcggcatgaacgatggcgacttcccgcgccgc
gcacccaaggccgacttcgacctgctggcgcaaccgggcatggcgcggcccggtgaccgc
tcgcgccgcgacgacgaccgctacctgatgctggaagcggtgctggccgcgcgcgacaag
ctgtatatcagctgggtggggcgcaatgtgcgagacaacagcgaacagccgccgtcggtg
ctggtgtcgcagctgcgcgattacctgattaacggctgggacatgagtaaagaggatatg
cacgcgcgcaccacggagcacgccttgcagccgttcagccgccgctactttgaagccggc
ggcctgttgacctacgcgcgcgagtggcgcgaggcgcatggcgaggaaatcgcggaagac
gaggcgaccgaactgccgccgttcgatatcgacgacaaattccgcctcaaactgggcagc
ctgcacaacttcctgcgccagccggtgcgcttcttcttccgccagcgcctgggcgtgatg
ttcggcgaagcggcgttggttggcgaggatgaagaaccgttttcgctcaacgcgctggaa
cgctatctgctcgaagacaccttgctcgacgacgccgaaacgccggaagaaatcgaccag
gtctacgacaagctgacgcagcgcgccgaacggctggcgcgcgaaggcgtgctgccgatt
ggcctgatcggccagcagtatcagcatcaactggtgcaggcgctggtgccggtgcgctgc
gcgtggctcacgctgcgccagcattacgaactcgccgcgccgaaggtggcgctaaatctg
gtgctggccggcgtgccgctggacgactggatcgaccaactgcgcagcaacggcagcgaa
accgtgtggctggcgcagatgtcgtcgcgcgtggccgacaagcagggcaaaccgcgcggc
gacaagctgattgccatgtggctgcgccagctggcgatatctgcggccggcatgcaggtc
accggccacctggtggcgcgcgacgctatcgtcaccatgcagccgctggatcccgagcag
gcgatggaagccttgcgggaactggtctgcctgtggcgggacggcatgaaccgtccgctg
cccaccgcctgcaagacggcgctggcgctggtgcaggagggcgatccgcgcgcagtgtac
gacggcggcttcgacatcggcggcgaaaacgaagacttgtgcctcaagcgcatgtggccc
gacttcagcgccttgagcgccgagccggatttcgacgatgtctcgcgcgcgctgtatggc
ccgctggccgactggatggaacaatgcatcaccatagaaaagattgaaggcgaggacgca
gcatga
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