Duncaniella sp. B8: FDZ78_01000
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Entry
FDZ78_01000 CDS
T05963
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dun
Duncaniella sp. B8
Pathway
dun00061
Fatty acid biosynthesis
dun01100
Metabolic pathways
dun01212
Fatty acid metabolism
dun02024
Quorum sensing
dun04146
Peroxisome
Module
dun_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FDZ78_01000
00071 Fatty acid degradation
FDZ78_01000
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FDZ78_01000
09145 Cellular community - prokaryotes
02024 Quorum sensing
FDZ78_01000
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dun01004
]
FDZ78_01000
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dun04147
]
FDZ78_01000
Enzymes [BR:
dun01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FDZ78_01000
Lipid biosynthesis proteins [BR:
dun01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FDZ78_01000
Exosome [BR:
dun04147
]
Exosomal proteins
Exosomal proteins of breast milk
FDZ78_01000
Exosomal proteins of breast cancer cells
FDZ78_01000
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QCP71246
UniProt:
A0AAE6BV42
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All DBs
Position
complement(207886..209547)
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AA seq
553 aa
AA seq
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MKDRESLNLYFQDAIRDNWDLPALTDFGGATLTYKDVARKIAKLHLLYQESGIRPGDKVV
LCAKNSSMWCVAFIGTLTYGAVIVPILADFKADNIQHLINHSDARLAIIDENIWEDLNPD
GMRTLLGAISVRDFSMLHSNDEKLIHARRHLNEIFGRRYPDRFTPEDVVYHIDTKEELCL
ISYTSGSTGFSKGVMLPYRSLWSNVQFCIENIPTGPGDGVVCMLPLAHMYGLTIDMLRPF
ICGNHIHILTRTPSPRIIMEAFAKVHPRYIVTVPLIIEKIIRTRVFPMLEKPLMKLMLMV
PYVDEKLLGKIKDRLTETFGGNVQEIIIGGAGLNRDVEKFLRRINFPYTVGYGMTECGPL
ISYSPSSENRMASCGRIVDRVEARIDSTDSAVKPGILHVKGENVMLGYYKNPEATEACMS
EDGWLSTGDICNLDSDGFLYIRGRDKNMILGPSGQNIYPEEIEDKLNNLSYVAESLIIDG
GDGRLVALIYPDIESLTSQGLDNDGIMGIMEENIKTLNSSLPAYSQVQRFKLMSEEFEKT
PKRSIKRYLYQSK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatcgcgaaagcctcaacctatatttccaggacgcaatccgtgacaactgggac
ctccccgcccttaccgacttcggcggtgccaccctgacctacaaggacgtagcccgcaaa
atagccaaactccacctcctctaccaggagagcggaatccgtccgggcgacaaagtagta
ctttgtgccaagaacagctccatgtggtgcgtggctttcatcggcaccctcacctacggc
gccgtcatagttcccattctcgccgacttcaaagccgacaacatccagcaccttatcaac
cacagcgatgcccgcctggccataatcgacgagaacatctgggaagacctcaaccccgac
ggcatgcgcaccctcctcggcgcaatctcagtccgcgacttctcgatgctccacagcaac
gacgaaaaactcatccacgcccgcagacacctcaacgaaatcttcggccgccgctacccc
gaccgcttcacccctgaagacgtcgtctaccacattgacaccaaagaagaactctgcctc
atcagctacacctccggatccaccggcttctcaaaaggagtcatgcttccctaccgcagc
ctgtggtccaacgtgcagttctgcatcgagaacatacccaccggtcctggcgacggagtg
gtctgcatgctccccctggcccacatgtacggtctcacaatcgacatgctccgcccattc
atctgcggcaaccacatccacatcctcacccgcacaccctcgccgcgcatcatcatggaa
gccttcgccaaggtccacccgcgctacatcgtcaccgtgcccctgatcatcgagaagatc
atccgcacccgcgtcttcccgatgcttgaaaagcccctcatgaaactcatgctcatggtg
ccatatgtagatgaaaagctcctcggcaaaatcaaagaccgcctcaccgaaaccttcggc
ggcaacgtgcaggaaatcatcatcggaggtgccggcctcaaccgcgacgtcgaaaaattc
ctccgccgcataaacttcccctacaccgtaggctacggcatgaccgaatgcgggcccctc
atctcctactcgccctccagcgaaaaccgcatggcatcatgcggacgcatcgtagaccgc
gtagaagcacgcatcgactccactgacagcgccgtcaaaccaggcattctccacgtcaaa
ggcgaaaacgtaatgctcggctactacaaaaatccggaagccaccgaagcctgcatgagc
gaagacggatggctctccaccggcgacatctgcaacctcgacagcgacggattcctctac
atccgcggacgcgacaaaaacatgatcctcggaccctccggccagaacatctaccccgaa
gaaatcgaagacaaactcaacaacctctcctacgtagccgaatcgctcatcatcgacgga
ggtgacggacgcctcgtggccctcatctaccccgacatcgaaagcctcacatcccagggc
ctcgacaacgacggaatcatgggcataatggaggaaaacatcaaaactctcaactccagc
ctcccggcctattcccaggtacagcgcttcaaactcatgagcgaagaattcgaaaaaacg
cccaaacgctccatcaaacgctacctctatcagtcaaaataa
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