KEGG   Duncaniella sp. B8: FDZ78_01355
Entry
FDZ78_01355       CDS       T05963                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
dun  Duncaniella sp. B8
Pathway
dun02024  Quorum sensing
dun03060  Protein export
dun03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dun00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    FDZ78_01355
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FDZ78_01355
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FDZ78_01355
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dun02044]
    FDZ78_01355
Enzymes [BR:dun01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     FDZ78_01355
Secretion system [BR:dun02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   FDZ78_01355
  Eukaryotic Sec-SRP protein
   FDZ78_01355
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW AAA_22 Zeta_toxin CbiA ATPase AAA_33 AAA_16 APS_kinase NTPase_1 nSTAND3 AAA_30 AAA_17 AAA_18 AAA_31 NACHT ArsA_ATPase DO-GTPase1 TsaE AAA_24 AAA_14 ParBc KAP_NTPase 6PF2K MMR_HSR1 NPHP3_N DUF6596 NB-ARC Thymidylate_kin AAA
Other DBs
NCBI-ProteinID: QCP71306
UniProt: A0AAE6BV74
LinkDB
Position
complement(293033..294367)
AA seq 444 aa
MFENLSERLERSFKILKGEGKITEINVAETLKDVRRALLEADVNFKVAKQFTDEVKAKAL
GMNVINAIKPGELMVKIVHDELARLMGGETAQVNLSGNPTVILMSGLQGSGKTTFSGKLA
RKLKSEQGKRPLLVACDVYRPAAIDQLKVLADQIDVPVYTEDGNKNPVEIAENAIRYAKT
NHLDLVIIDTAGRLAVDEQMMQEIAAIKKAVKPQETLFVVDSMTGQDAVNTAKEFNDRLD
FDGVVLTKLDGDTRGGAALSIRTVVTKPIKFVGTGEKLDALDLFHPSRMADRILGMGDIV
SLVEKAQNAYDEKQARELQRKIAKNQFNFNDFLQQIQQIQKMGNLKELASMIPGVGKAIK
DIDIDDNAFKGIEAIIRSMTEQERQHPEIINGSRRKRIAKGSGTDIQEVNRLIKQFDDAR
KMMKAVSGIKNPMALMRGMKGMRR
NT seq 1335 nt   +upstreamnt  +downstreamnt
gtgtttgaaaatctaagcgaaagacttgaaagaagtttcaagatactcaaaggtgaaggc
aagatcaccgagataaacgtagccgaaacccttaaggacgtgcgccgcgcgctcctcgaa
gccgacgtcaacttcaaagtagccaagcagtttaccgacgaggtaaaagccaaggctctg
ggcatgaatgtgatcaacgccatcaagccgggcgaactcatggtcaagattgtccacgat
gagctggcacggcttatgggtggcgagacagcccaggtaaatctgtcaggcaatccgacc
gtcatcctcatgtcaggtctgcagggttccggtaagaccaccttcagcggcaaactcgcc
cgcaagctcaagtcagagcagggaaaacgtccgctccttgtggcatgcgacgtctatcgt
cccgcagctattgaccagttgaaagtgctcgccgaccagatcgatgttcccgtctataca
gaggatggcaacaagaatccggtagagattgcagaaaacgctatccgctacgccaaaaca
aaccatcttgatctggtgatcatcgacaccgccggccgtcttgccgtcgacgaacagatg
atgcaggagatcgcggcaatcaagaaagcagtcaagcctcaggaaactctgtttgtggtc
gactccatgaccggtcaggacgccgtcaatactgccaaagaattcaacgaccgtctggac
ttcgatggcgttgtcctcaccaaacttgacggtgacacacgcggcggcgcggccctctct
atccgcactgtagtaaccaagcccatcaaattcgtaggtacaggcgaaaaacttgatgcc
cttgatctcttccacccctcgcgtatggccgaccgtattctcggcatgggcgacatcgta
tcgctcgttgaaaaggcccagaacgcctatgacgaaaagcaggcccgcgaactccagcgc
aaaattgccaaaaatcaattcaatttcaacgacttcctccagcagatccagcagattcag
aaaatgggtaatctgaaggaacttgcatcaatgatacccggtgtaggcaaagctatcaag
gacatcgacattgacgacaacgcattcaaaggcatcgaggccatcatccgctcaatgacc
gagcaggaacgccagcatcctgaaatcatcaatggcagtcgccgcaagcgcatagccaaa
ggctccggcacagacatccaggaagtcaaccgcctcataaagcagtttgacgatgcccgc
aagatgatgaaggccgtttcaggcatcaaaaacccgatggcccttatgagaggcatgaag
ggcatgcgccgctga

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