Duncaniella sp. B8: FDZ78_01960
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Entry
FDZ78_01960 CDS
T05963
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
dun
Duncaniella sp. B8
Pathway
dun00730
Thiamine metabolism
dun01100
Metabolic pathways
dun01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
FDZ78_01960 (thiC)
Enzymes [BR:
dun01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
FDZ78_01960 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QCP71419
UniProt:
A0AAE6BU52
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All DBs
Position
411650..413350
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AA seq
566 aa
AA seq
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MEIENIDVNSYPGSEKVYIDGKLHPIRVAMRRVNLTPTVKIIDGERLTRENGSVYVYDTS
GVYTDPNVTVDINAGLPRLREEWIAGREDLEQLSCITSDYGRMREADSSLDSIRFSHRYA
PRRAAEGREITQMALARQGVITPEMEYVAIRENNNAEALGIKSHITPEFVRQEVAAGRAV
IPANINHPEAEPMIIGRNFLVKLNTNIGNSALSSGIKEEVSKAVWSCYWGGDTLMDLSTG
DNIHETREWIIRNCPVPVGTVPVYQALEKVNGKVEDLTWEIYRDTLIEQAEQGVDYFTIH
AGALRAHADMVQERLTGIVSRGGSIMTRWAVIHDQENFLYTHFDEICEILARYDVAVSLG
DGLRPGSIHDANDRSQFLELDVLGQLTEIAWKHNVQVLIEGPGHVPMHKIRENMDRQIDK
CHEAPFYTLGPLTTDIAPGYDHITSAIGAAQIAWMGTAMICYVTPKEHLALPNLEDVRNG
VITYKIAAHAADLAKGHPGAQVRDDAMSKARFEFRWKDQFNLSLDPARARQYYVESHKDD
DHFCTMCGPNFCAMRITQQLVDDCAK
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagaaaacatcgacgtaaacagctatcccggttcagaaaaagtctacattgac
ggaaaactccatccgatccgcgtagccatgcggcgtgtcaacctcacccctactgtaaaa
atcattgatggcgaacgcctgacccgcgagaacggctctgtctatgtctatgacaccagc
ggtgtctacacagacccgaacgtaaccgttgacatcaacgccggacttccccgtctgcgc
gaggagtggatagccggacgcgaagacctcgaacaactctcatgcatcacctctgactac
ggacgcatgcgcgaagccgacagctctctcgactcaatccgcttcagccaccgctacgca
ccccgccgcgcggccgaaggcagggaaataacccagatggcgcttgcccgccagggtgtc
atcacccctgagatggaatatgtagccatccgcgagaacaataatgccgaagccctcggc
atcaagagccacatcactcctgaattcgtacgccaggaagtagcagccggacgtgccgtc
atccccgccaacatcaaccatcccgaagccgaaccgatgatcatcggccgcaacttcctc
gtaaaactcaacaccaacatcggaaactccgccctctcttccggaatcaaggaagaagtc
agcaaagccgtgtggagctgctactggggaggcgacactctgatggacctctcgaccggc
gacaacatccacgagacccgcgaatggatcatccgcaactgcccggtcccggtcggaaca
gtccccgtctaccaggctcttgaaaaagtcaacggcaaagtggaggatctgacctgggaa
atctatcgcgacacactgatcgagcaggcagaacagggtgtggactacttcaccatccat
gccggagctctccgcgctcatgctgacatggttcaggaacgtctgaccggcatcgtgtcg
cgcggcggctctataatgacccgctgggccgtgatccacgatcaggaaaacttcctctac
acccatttcgatgaaatctgtgagatcctcgcccgctacgacgtagcagtttcgcttggc
gacggtctgcgtccgggttctatccacgatgccaatgaccgctcgcagttcctcgaactc
gatgtgctcggtcagctcaccgaaatagcctggaaacacaatgtacaggtgctcatcgaa
ggtcctggacacgtgccgatgcacaagatccgcgagaacatggaccgccagatcgacaaa
tgtcacgaagcgccgttctacaccctcggcccgctgaccaccgacatcgctcccggctac
gaccacatcacctcggcaatcggagccgcacagatagcctggatgggcaccgctatgatc
tgctacgtgacccccaaggaacatctcgcactccccaacctcgaagatgtgcgcaacggt
gtgatcacctacaagatcgcagcccatgccgccgaccttgccaaaggacatcccggcgca
caggtccgcgatgacgccatgagcaaggcccgcttcgaattccgctggaaagaccagttc
aacctgtcgctcgacccagcccgcgcacgtcagtactacgtagagagccacaaggacgat
gaccacttctgcaccatgtgtggtcccaacttctgtgcgatgcgaatcacccagcaactt
gttgacgactgcgcaaaataa
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