Duncaniella sp. B8: FDZ78_01995
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Entry
FDZ78_01995 CDS
T05963
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
dun
Duncaniella sp. B8
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dun03009
]
FDZ78_01995
Enzymes [BR:
dun01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
FDZ78_01995
Ribosome biogenesis [BR:
dun03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FDZ78_01995
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QCP71426
UniProt:
A0AAE6BVD4
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All DBs
Position
complement(421566..423131)
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AA seq
521 aa
AA seq
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MDSNEKKSKRPRIGVRPINSDSVENRSDFSSQEGGHEGQERQERHQSSYGNSSYGNNRPY
QPRPYNNNRQGGYNNNRYNNNNQGGYNRYNNNNNRYNNNYQPRPQANPQLEGEPQTSPEG
SVNATSSEGENAGGGYQPRYNNNRYNNQGGYNNNRQGGYNNNRQGGYSNNRQGSYNNNRQ
GGYNNNRQGSYNNNRQGGYNNNRQGGYNNNRQGGYNNNRYNNQGGYNNNRQGGYNNQNGY
NNRQGGFKKQAPRQNQYGMPQGGRSFTPRPRRIEYEMPLPDPNEQIRLNKFMANAGLCSR
READEFIQQGLIKVNGNVVTELGTKISHSDVVEYDEKVVALESKCYILLNKPKDCVTTSD
DPNGRLTVMDLVKGACDERIYPVGRLDRNTTGVLLLTNDGDLASKLTHPKYVKKKIYHVW
TDKDIAEEDMQRIADGIELEDGPIHADAISYATDTDRNQAGIEIHSGRNRIVRRIFESLG
YHVTKLDRVYFAGLTKKNLPRGRWRYLTQEEVNFLKMGSFE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaacgaaaagaaaagcaaacgcccgcgaatcggagttcgccccatcaattca
gacagtgtagaaaaccgcagtgacttctcatcacaggaaggtggacatgagggccaggaa
cgccaggaacgtcatcagtcttcctatggcaacagctcttatggcaacaaccgtccatat
cagccgcgtccctataacaacaatcgtcagggcggctataacaacaaccgttacaacaat
aacaaccagggcggttataaccgttacaacaacaataataaccgctacaacaataattat
cagccccgtccgcaggctaatccccagctcgaaggagagcctcagacttcacccgaagga
agcgtgaacgcaacttcatcagaaggcgaaaacgcaggcggaggctatcagccccgttac
aacaataaccgttataacaatcaaggcggctacaacaacaatcgtcagggcggctataac
aacaatcgccagggcggctacagcaacaaccgtcagggcagctacaacaacaaccgccag
ggcggctacaacaacaaccgtcagggcagctacaacaacaaccgccagggcggctacaac
aacaatcgtcagggcggctacaacaacaatcgtcagggcggctataacaataaccgttat
aacaatcagggcggctataacaacaaccgccagggtggctataacaaccagaacggctac
aacaaccgtcagggtggattcaaaaagcaggctccccgccagaaccagtatggaatgccg
cagggaggtcgcagcttcactccgcgcccccgccgcatagaatatgaaatgccgctgccc
gatccaaatgaacagatccgtctcaacaagttcatggccaatgcaggtctctgctcgcgc
cgcgaagctgatgaattcatccagcagggtctgatcaaggtcaacggcaatgttgtcacc
gaactcggaacaaagatctcacacagcgatgtggttgaatatgatgaaaaggtagtggca
ctggaaagcaagtgctacatcctgctcaacaagccgaaagactgcgtgaccaccagcgat
gatcccaacggacgtctgactgtgatggatctcgtcaagggagcctgcgacgaacgcatc
taccccgtaggccgtctcgaccgcaacacaaccggtgtgcttctgcttaccaacgacggc
gatctcgcttccaagctgacccaccccaaatatgtcaagaaaaagatctaccatgtctgg
actgacaaagatatagccgaagaggatatgcagcgtattgctgacggcattgagcttgaa
gacggacctatccacgccgatgctatctcatatgccaccgacactgaccgcaaccaggcc
ggtatcgagatccactccggacgcaatcgcatcgtgcgccgtatctttgaaagcctcggc
tatcacgtgaccaagctcgaccgcgtttacttcgccggactcaccaagaagaacctgccc
cgcggtcgctggcgctatctgacccaggaagaagtaaacttcctcaaaatgggctcgttt
gaataa
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