Duncaniella sp. B8: FDZ78_02550
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Entry
FDZ78_02550 CDS
T05963
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dun
Duncaniella sp. B8
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dun03032
]
FDZ78_02550 (topA)
03400 DNA repair and recombination proteins [BR:
dun03400
]
FDZ78_02550 (topA)
Enzymes [BR:
dun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FDZ78_02550 (topA)
DNA replication proteins [BR:
dun03032
]
Prokaryotic type
DNA Topoisomerases
FDZ78_02550 (topA)
DNA repair and recombination proteins [BR:
dun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FDZ78_02550 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
QCP71523
UniProt:
A0AAE6BUQ4
LinkDB
All DBs
Position
549109..551436
Genome browser
AA seq
775 aa
AA seq
DB search
MLKNLVIVESPAKAKTIEKFLGKDYKVMSSYGHIRDLRKKDISIKVDSDFQPVYEIPADK
KNLVTELKKAAKEAETVWLASDEDREGEAIAWHLYEVLGLKPENTKRIVFHEITKNAILE
AIENPRDIDLHLVDAQQARRVLDRLVGFELSPVLWKKIKPALSAGRVQSVAVRLIVDREN
EINSFKSEPYYRVTALFTIPGGAQLRAELSKRLPDEESAREFLEACKKAVFTVSDISVKP
LKKSPAPPFTTSTLQQEAGRKLGFTVSQTMMVAQKLYEAGHITYMRTDSLNLSKLAVATI
SKLITEELGDKYLKVRRYHTNSKGAQEAHEAIRPTYIDKETVEGTSQEKRLYRLIRLRTM
ASQMADAELEKTTIDISPSGRQEHFTSSGEVIKFDGFLKVYLEGNDDDDSQSPEGDDMLP
QVNPGEQLTAENISATERFTLAPPRYTESSLVKKMEELGIGRPSTYAPTISTIQHREYIV
KGEKAGEKRPFKVLTLKADGKLSSATKTESVGAEKGKLIPTDTGIIVNEFLTANFPDILD
YDFTADMEQKFDRIAEGESDWNKEIARFYGLFHPEVEKANEMRTEHKVGERQLGTDPATG
EPVSVKIGRFGPVVQIGSADSKEKPRFASLRKDQSVFDITLEEALKLFDLPRTVGEIEGK
TVVAAIGRFGPYIRHDGKFVSIPKDLSPTSITLEEATELIRAKREADSNKVVKTFAEEPE
IQILNGRYGVYIAHNKTNYKIPKSVTDPAALTLDEVKAIMADQEKAPKRTVRRKK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaaacctcgtcatagtagagtctccggccaaagccaagaccattgagaaattc
ctcggcaaggactataaggtcatgtcgagctacggtcatatccgtgacctccgcaagaaa
gatatcagcatcaaggttgattccgacttccagccagtctatgaaattccggccgacaag
aaaaatcttgtcaccgagctaaagaaagccgccaaggaggctgagacagtctggctcgca
tctgatgaggaccgcgagggagaagccatagcatggcatctctacgaggtgctcggactg
aagccggaaaacaccaagcggatagtctttcacgagatcaccaagaacgctattcttgaa
gcgatcgagaatccgcgtgacatcgacctgcatcttgtcgatgcccagcaggcccgacgg
gtgctcgaccgtctggtgggcttcgagctgtcgcctgtgctctggaagaagatcaagccg
gcgctctcggccggccgtgtgcagtcagtggccgttcgtctgatagttgaccgcgagaac
gagatcaattccttcaagtcggagccttactaccgagtgacagcgcttttcaccattccc
ggcggtgcccagctgagggcggaactgtcaaagcgtcttcctgatgaggaaagcgcgcgt
gaattcctcgaagcctgcaagaaggcagtgtttacggtttccgacatcagcgtcaagcct
ctcaaaaagtcgccggcgccccccttcaccacctcgaccctccagcaggaagctggccgc
aagctcggattcactgtgtcacagaccatgatggtggcccagaagctctacgaagcaggt
cacatcacttatatgcgtaccgactcgctcaacctctcgaagcttgctgtggcaaccata
tcgaaactcatcaccgaagaactcggcgataaatatctgaaggtgcgccgctatcacacc
aactctaaaggcgcgcaggaagctcacgaggccatccgcccgacctatatcgacaaggag
acggtggaaggcacctcgcaggaaaagcggctttaccgtctgatccgcctgcgcacaatg
gcttcacagatggcagatgccgaactggagaagaccactatcgacatcagtccctcaggc
cgtcaggagcatttcacttcaagcggtgaggtcatcaagtttgacggtttcctgaaagtc
tatctcgaaggcaacgatgatgatgacagccagagtcccgaaggtgacgacatgttgccg
caggtcaatcccggcgaacagcttacagccgaaaacatcagcgccacggagcgtttcact
ctcgcgcctccgcgctataccgaatcatcgctcgtcaagaagatggaagagctcggcata
ggccgcccgtcgacctacgctccgaccatctcgaccatccagcaccgcgaatacatagtc
aaaggggagaaagccggcgagaagcgtccgttcaaggttctgacacttaaagccgatggc
aaactaagctcggccacaaagaccgaaagcgtaggtgcagaaaaagggaagctcatcccg
accgacaccggcattattgtcaatgagttcctcacggccaatttccctgacattctcgac
tatgacttcacagccgacatggagcagaaattcgaccgcatagccgaaggcgaaagtgac
tggaacaaggagatagcccgtttctacggactcttccatccggaagtggagaaggccaac
gaaatgcgcaccgagcataaggtgggcgaacgccagttaggcaccgatccggccaccggc
gaacctgtttcggtcaagataggccgtttcgggcctgtggtgcagatcgggtcagccgat
tccaaggaaaagccgcgtttcgcgtctctgcgcaaagaccagagcgtttttgacatcact
cttgaggaagctctgaaactcttcgacctgccacgcactgttggcgagatagaaggcaag
acagtggttgccgcaataggccgtttcgggccctacatacgccacgacggcaagtttgtc
agcatccccaaggacctttcaccgacttcgattacccttgaagaagccaccgagctgatc
cgcgccaagcgcgaggctgacagcaacaaggttgtcaagacgttcgccgaggaaccggag
atacagatactcaacggccgctacggtgtctacatagcccacaacaagaccaactataag
attccgaaaagtgtgaccgatccggcagctcttactctcgatgaggtcaaggctatcatg
gcagaccaggagaaggcgcccaagcgcactgtgcgacgcaagaaataa
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