Duncaniella sp. B8: FDZ78_02905
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Entry
FDZ78_02905 CDS
T05963
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dun
Duncaniella sp. B8
Pathway
dun03420
Nucleotide excision repair
dun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FDZ78_02905
03430 Mismatch repair
FDZ78_02905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dun03400
]
FDZ78_02905
Enzymes [BR:
dun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FDZ78_02905
DNA repair and recombination proteins [BR:
dun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FDZ78_02905
MMR (mismatch excision repair)
Other MMR factors
FDZ78_02905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
QCP71592
UniProt:
A0AAE6BVU4
LinkDB
All DBs
Position
complement(618972..621320)
Genome browser
AA seq
782 aa
AA seq
DB search
MDENYLDELNEQQRAAVEYCDGPQLVIAGAGSGKTRVLTYKIVHLLRLGYEPWRILALTF
TNKAAKEMRERVEQLVGGAVASKLWMGTFHSIFARILRANAELIGFKSNFTIYDSADSKS
LVKTIIKDMQLDDKIYKPSAVLSAISGAKNALVSPEDYALSRDVMEADARAKRPELYAVY
RAYRDRCVVAGAMDFDDLLYYTNVLLRDNPDVLRHYREFFSYVLVDEYQDTNFAQHVIVT
QLTRESGRLCVVGDDAQSIYSFRGANIRNILDLRKTYSALSIFKLERNYRSTRNIINAAG
SLIDKNSEQIPKTVYSENETGALIEVVKCYSDFEEAYQVASRLSQLKMTSGDSADEFAIL
YRTNAQSRVLEEALRKRNVPYRIYGGLSFYQRKEVKDAIAYFRLALNPDDDEALRRVINF
PARGIGETTLAKLTRAAIDGNVSLWTVIQEPDRYPAGLNAGTLRKLDRFAGLITEFVQAD
RKGADALELATRIIERTEMLKMYLHDSTPENLSKQENLQELISGVKGFVETRVEEGSDSM
SLADFMAEVSLATDQDSDSGDASEERVTLMTVHAAKGLEFNNVFVVGVEEELFPSAMAQD
SPAQIEEERRLMYVAMTRAKKFCMLTYAGSRFRNGQTVSCRPSRFLRDIDQRYLRLATND
NLGDDAPKVRPTVNYTASMAGSARSLNSLRKVQPSSGAPQSFRRPGQMQPSAGKPASDVR
YALHSVSEVAEGTVIEHAKFGRGAIVNIDTAGPDPRITVKFENTDTRTLMLKFAKFSIVG
TE
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaattatcttgatgaactcaacgaacagcagcgggccgcagtagagtattgc
gacggacctcagcttgtgatagcgggagccggctcaggcaagacccgtgtgctaacctat
aagatagttcatctactccgcctcggctatgagccgtggcggattcttgctctgaccttt
acgaacaaggctgccaaagagatgcgcgagcgtgtggagcagcttgtgggcggcgctgtg
gcttcgaaactgtggatgggtacctttcattcgatctttgcgcgtattctccgcgccaat
gccgaactgataggattcaaaagcaatttcacgatctatgacagcgccgacagtaaatcg
cttgtcaagactatcataaaggatatgcagcttgacgataagatctacaagccgtcggct
gtgctttcggccatttccggtgccaagaacgcacttgtctcgcctgaagactatgcgctg
agccgcgatgtgatggaagccgatgcgagagccaaacgccccgaactctatgcggtctac
agagcctatcgcgaccgttgcgtggtggccggggctatggattttgacgatctgctctat
tataccaatgtactgttgcgcgacaatccggatgtgctccgccactatcgggagtttttc
agctatgtgcttgtcgacgagtatcaggacacgaatttcgcgcaacacgtgatagtgacc
cagcttacacgcgaaagcggcaggctctgtgtggtcggcgacgatgcccagagcatctac
tcgttccggggtgccaatatccgcaatatccttgatctgagaaagacgtattctgcactg
tctatctttaaactcgaacgcaactatcgctcgacacgtaacatcatcaatgccgccggt
tcacttatcgacaagaacagcgagcagatacccaaaaccgtttattcagagaacgagacc
ggggcgctgatagaggtggtcaagtgctatagcgatttcgaggaggcctatcaggtggct
tcgcggctgtcgcagctgaaaatgacgagcggcgacagtgccgatgaattcgccatacta
tatcgtaccaatgcccagagccgtgtgctggaagaggctttgagaaaacgcaatgtgcct
tacaggatttacggtggtctgtcgttctaccagcgcaaggaggtaaaggacgccattgcc
tatttccgtctggctttgaatcctgatgatgacgaggcgctgagacgtgtgatcaatttc
ccggcgcgaggcatcggggagacaactctcgccaagctgacacgtgcagcgattgacggc
aacgtaagcctctggactgtgattcaggagcctgacaggtatccggccggtctcaatgcc
gggactttgcgtaaactcgacagatttgccggtctgataactgaattcgtgcaggctgac
cgcaagggggccgatgcgcttgaactggccaccaggatcatagaacgtactgagatgctg
aagatgtatctccacgacagcacacctgaaaatctttcgaaacaggaaaaccttcaggaa
ctgatttcaggcgtgaagggctttgtggagacccgtgtggaggaggggagtgacagcatg
tcgctcgccgattttatggcggaggtctcgcttgccactgaccaggattcggattccggc
gacgcaagcgaggagcgcgtgactctgatgactgtccatgctgcaaaggggctggaattc
aataatgtgtttgtggtcggagttgaggaagagctttttccgtcggctatggctcaggat
tcaccggcccagatcgaagaggagcgccgtctgatgtatgtggctatgacgagagcgaaa
aaattctgcatgctgacatatgccggatcgcgtttccgcaacggtcagacggtcagctgc
cgcccgtcgcgcttcctcagagatatagatcagcgctatctgcgtcttgccaccaatgac
aatcttggagacgatgctccgaaggtgcgcccgacggtaaattatacggcatcaatggcc
ggctcagcccgcagtctgaactcgctgcgcaaggttcagccttcgtcaggcgcgccgcag
tcattcagacggcccggacagatgcagccgtctgccggaaagcctgcgagcgatgtcaga
tatgcccttcattcggtgagcgaagtggcggagggaacggtcatagaacatgccaagttc
ggccgtggtgcgattgtcaatatcgacaccgcagggcccgatccgagaatcacagtgaag
ttcgagaataccgacactcgcaccctgatgctgaagtttgcgaaattttcaatagtcgga
accgagtaa
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