Duncaniella sp. B8: FDZ78_04335
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Entry
FDZ78_04335 CDS
T05963
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
dun
Duncaniella sp. B8
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dun03000
]
FDZ78_04335
Transcription factors [BR:
dun03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FDZ78_04335
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QCP71847
UniProt:
A0AAE6BWE3
LinkDB
All DBs
Position
complement(945586..946512)
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AA seq
308 aa
AA seq
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MGKTVNLTQLKSLEKFVTEFSNLSDDYVFTRLTESNRTPLLISDTGPVRFDGMSWFLCFG
GCLDFEVNLTPASLTPNSVGVTRPGSFIEVKNIDWSGLDCYMLFVSSDFIRDINFDLNIL
GSLAPMGERGLKENPVITILPEEATLLRAYFEILNHNTHNIHDTDSTYGKSIARCVIAAL
TYQLIQIVSRRIPADSGDRPKSRRMTYVHEFIQLVHEYHRSERTVAFYADKLFISPKYLS
LIIKETLGRSAAEIIDDYVILEAKNLLRFSGKNIQQVSYELNFPNQSSFGKYFKHLTGFS
PSEYQRSV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagactgtaaatctgacacagctgaaatcgcttgaaaaattcgtcactgaattt
tcgaatctcagtgatgactatgtgttcacacgtctgaccgagtcgaaccgcacaccgttg
ctgatatcggataccgggccggtcagatttgacggcatgtcgtggtttctctgttttggc
ggatgccttgactttgaagtgaatctgacgccggcttccctgaccccaaattcagtagga
gtgacgcggccggggtcttttatcgaggtcaagaatatcgactggtccggcctggattgc
tatatgctctttgtgtcaagtgattttatccgtgacatcaactttgatctgaacatcctc
ggatctttggcgcctatgggcgagagagggcttaaggagaatccggtcataacgattctg
cctgaggaagccactctgctgagagcctatttcgagatactgaaccataacacgcacaat
attcatgatacagacagcacctacggcaagtcaatagccaggtgtgtgatagcggcgctg
acttatcagctgatacagattgtcagccgcaggattccggcagactccggtgaccggcct
aagtcgaggagaatgacttatgtgcacgagttcatacagctggtgcatgagtatcaccgc
agcgagcggacggtagctttctatgccgacaaactttttatatctccgaaatacctttcg
ctgatcatcaaggagactcttgggcgttcggctgctgaaatcattgatgactacgtgata
cttgaagccaagaatctgctgcgtttctcagggaagaatatccagcaggtaagctatgag
ctgaactttccgaaccagtcttctttcgggaagtatttcaagcatctgaccggattttct
ccgtcggaataccagcgttcggtctga
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