Duncaniella sp. B8: FDZ78_04430
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Entry
FDZ78_04430 CDS
T05963
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
dun
Duncaniella sp. B8
Pathway
dun02024
Quorum sensing
dun03060
Protein export
dun03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FDZ78_04430 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FDZ78_04430 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FDZ78_04430 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dun02044
]
FDZ78_04430 (secD)
Secretion system [BR:
dun02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FDZ78_04430 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
Sec_GG
SecD_1st
MMPL
ACR_tran
DUF4227
DUF5531
Motif
Other DBs
NCBI-ProteinID:
QCP71866
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All DBs
Position
964255..967146
Genome browser
AA seq
963 aa
AA seq
DB search
MQSKGSLGSVVAGVIAIFMVLICLFYLSFTLVTNHYEKKAEEYAAVEAAKDNNSPETKRK
AYSEYIKNIANEKVYLGYTFNEVQKLGVGLGLDLKGGMNVTLQVSVPDILRSMANAEGNP
YFERAVMSADSITRANKSNDFIDVFCAEYRKLDPQGDLSVVFKDQVKRGDSMDAIKNSLR
QEVKDRVSSSTNVLRTRIDQFGVVAPNIQELEKDGQILLELPGVKEHDRVRELLKSSANL
EFYETTQFNEIAPMLQALDNALRTDTTGNGKGLFDYFLQVGNPYRPISVGSATETARDTI
DAILASNVAKGILPSNLKLAWEFKPEIVQVDDSVRGKRNLSIYQLVALKTSNGKPALSGD
VITSATSDYEAMNGNYVSMNMKPEAARQWARITAANLNKPVAIVLDNQVYSSPNVNSVIE
GGRSQITGNFTTDEAKDLANVLKSGKMAAKVDIISDTVIGPSLGEQAIHDGLWSFIIAIV
LLMIFMCLFYGLVPGIIANIALIFNIFFTFGILASFQAVLTLSGIAGIVLALGMAVDANV
LIYERAKEELRAGKSVRTAIADGYSNAFSAIFDSNLTSIITGVILLLFGTGPIKGFATTL
IIGIVCSFFTAVYLTRLIYIMCAKTKPFEKLTFTTPLSAKMFSDTHFNFLGARKVSFGIV
GAVVAIVIISFFARGLNQGIDFSGGRNYVVQFDHPVKTHELQAQLAPLFDGAQLSVITID
DDTKVRISTNYKIDSDEEGIDNEITGILYKGLENQLNGMSIEDFSTTNENIGIMSSQKVG
PTVANDMRTDAYIAVILALLAMFFYILLRFRNIAFSLGALAAVAFTAFTIIGFYSLFWGL
FPFAMEIDQSFIAAILTVIGYQINDTVVVFDRVRENVQLYPKQNFFDTINSSMNSTLGRT
VMTSCSTLLVLLCIFILGGDAIRSFVFAMIFGVIIGTLATIYVAAPVAYLTDARRNAKKA
AKA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcaaaggatctttgggaagtgttgttgcaggtgtgatcgccattttcatggtg
ctcatctgcttgttctacctttcattcacgttagttaccaaccactacgagaagaaagcg
gaagaatatgccgccgtcgaggctgccaaggacaacaacagccctgaaactaaacgtaag
gcctacagcgagtacatcaagaacatcgcaaacgaaaaggtttatttaggctatacattc
aatgaagtacagaaactcggagtaggtctcggcctcgacctcaaaggtggtatgaacgtc
accctgcaggtatcggtacccgacatcctccgctcgatggccaacgcagaaggcaacccc
tacttcgaacgtgccgtcatgagcgccgactcaatcacccgtgccaacaagagcaatgac
ttcatagacgtcttttgcgcagaataccgtaagctcgacccccagggcgatctttcggta
gtgttcaaggatcaggtgaagcgcggtgacagcatggacgccatcaagaactcactccgt
caggaagtgaaagaccgcgtcagcagctccaccaacgtgctccgcacccgtatcgaccaa
ttcggagtcgttgcccccaacatccaggaacttgaaaaggacggccagatcctccttgag
cttcccggcgttaaggaacacgaccgtgtacgcgagcttctcaaatcaagcgccaacctc
gaattctacgagaccacccagttcaacgaaatcgccccgatgctccaggcgcttgacaac
gccctgcgcaccgacaccaccggcaacggcaaaggtctcttcgactacttcctccaggtc
ggcaacccctaccgcccaatcagcgtaggttcagccaccgaaactgcccgtgacaccatt
gatgccatccttgcatcaaacgtagccaaaggcatccttccctccaacctcaaacttgca
tgggaattcaagcctgagatagtacaggtcgacgactccgtacgcggcaagcgcaacctc
agcatctatcagctcgtagccctcaagacctcaaacggcaaaccagcactcagcggcgac
gtcatcacttcagctaccagcgactacgaagccatgaacggcaactacgtttcaatgaac
atgaaacccgaagcagcccgccagtgggcccgcatcactgccgccaacctcaacaagccc
gtggctatcgtgcttgacaatcaggtctactcttcgcccaacgtcaactcagtgatcgaa
ggcggacgctcgcagatcaccggcaacttcaccaccgatgaagcaaaagaccttgccaac
gtgctcaagagcggcaagatggcagccaaggtcgacatcatctccgacaccgtgatcggt
ccgtcgctcggcgaacaggccatccacgacggtctctggtcgttcatcatcgccatcgtg
ctcctgatgatcttcatgtgtctcttctacggccttgtccccggcatcatcgccaacatc
gccctcatcttcaacatcttcttcaccttcggcatcctcgcgtcattccaggccgtgctg
acactctccggcatcgccggtatcgtgctcgcgctcggtatggcagttgacgccaacgtg
ctcatctacgaacgtgccaaagaagaactccgcgccggcaagagcgtacgcaccgccatc
gccgacggttacagcaacgcattctcagccatctttgactcgaacctcacttcgatcatc
acaggtgtgatcctccttctcttcggaacaggtcctatcaaaggcttcgccaccaccctc
atcatcggtattgtctgctcattcttcaccgctgtctacctgacacgccttatatatata
atgtgtgccaagaccaagcccttcgaaaagctgacattcaccactcccctttcggccaag
atgttctctgacacccacttcaatttcctcggcgcccgcaaggtcagcttcggaattgtc
ggcgcggttgtagccatagtgatcatctcgttctttgcccgcggcctcaaccagggcatc
gacttctcaggcggccgcaactatgtggttcagttcgatcatcctgtgaagacccacgaa
ctccaggctcagctcgcacccctctttgacggtgcacagctcagtgtcatcaccattgac
gacgacaccaaggtccgcatctcgaccaactacaagatcgactctgacgaagaaggcatc
gacaacgaaatcaccggcatcctctacaagggccttgagaaccagctcaacggaatgagc
atcgaagacttctcgaccactaacgagaacatcggcatcatgtcatcgcagaaagtaggt
ccgaccgtggccaacgacatgcgcaccgacgcttacatcgccgtgatcctcgcccttctg
gccatgttcttctacatcctgctccgtttccgcaacatcgccttctcgctcggcgcactt
gcagctgtagccttcacagccttcaccatcatcggtttctactcgctcttctggggcctc
ttccccttcgctatggaaatcgaccagtcattcatcgccgccatccttacggttatcggt
tatcagatcaatgacaccgtggtagtcttcgaccgtgtgcgtgaaaacgttcagctctat
ccgaaacagaacttcttcgacaccatcaacagctcgatgaactctactctcggccgtaca
gtgatgacctcatgctcaacgctcctcgtgctcctgtgcatcttcatcctcggcggtgac
gcgattcgctcattcgtattcgcaatgatcttcggtgtgatcatcggcactctcgccaca
atctacgtggcagctcccgtggcttacctcaccgatgcccgccgcaacgccaagaaagca
gccaaggcataa
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