Duncaniella sp. B8: FDZ78_04785
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Entry
FDZ78_04785 CDS
T05963
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dun
Duncaniella sp. B8
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dun03016
]
FDZ78_04785 (truA)
Enzymes [BR:
dun01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FDZ78_04785 (truA)
Transfer RNA biogenesis [BR:
dun03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FDZ78_04785 (truA)
Prokaryotic type
FDZ78_04785 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QCP71935
UniProt:
A0AAE6BYI4
LinkDB
All DBs
Position
complement(1052084..1052815)
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AA seq
243 aa
AA seq
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MRYFMQLSYRGAPFHGWQCQPGEVTVQSVLEDALSMILRREMKITGAGRTDAGVNARMMV
AHFDLDTPLGDAGELVRRLNAVVGKDIAVQKIYEVEPDRHARFDAVSRTYHYYAVTEKTP
FFYPLSWKAPATLDFDAMNRAAEILLETSDFTSFSKLHTDVKTNICRVSYARWERLGEHE
WVFVITADRFLRNMVRAVVGTLVDVGRGKMTIGQFREVIDRRDRCAAGTSMPGEALFLWE
VRY
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagatatttcatgcagctctcttaccgcggtgcgcctttccacggctggcagtgtcag
ccgggcgaggtgacagtccagtcggttctcgaagacgctctgtcgatgatcctgcgccgc
gaaatgaaaatcaccggcgccggacgcacagatgccggagtcaacgcgcgcatgatggtg
gcccattttgatcttgacacccctctgggcgatgccggagagcttgtcaggaggctcaat
gcggttgtcggcaaagatattgccgtgcagaagatctatgaggtcgagcctgaccgccat
gcgcgcttcgatgccgtcagccgaacttaccactattatgcggtcactgagaagaccccg
tttttctaccccctgagctggaaagccccggccacgcttgatttcgatgccatgaaccgt
gcggccgaaatactgcttgagacctctgatttcacatcattctcaaagcttcacaccgat
gtcaaaaccaacatctgccgtgtgagctatgccagatgggagaggctcggcgagcatgaa
tgggttttcgtcattactgccgaccgctttctgcgcaacatggtccgcgccgtagtggga
actctcgtcgacgtgggccgcggtaaaatgaccatcgggcagttccgtgaagtgattgac
cgccgcgaccgctgtgcggccgggacctcgatgccgggagaggctttgtttctctgggag
gtcagatactga
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