Duncaniella sp. B8: FDZ78_05885
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Entry
FDZ78_05885 CDS
T05963
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
dun
Duncaniella sp. B8
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dun02000
]
FDZ78_05885
Transporters [BR:
dun02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FDZ78_05885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
QCP72133
UniProt:
A0AAE6EPN6
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All DBs
Position
1331904..1333967
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AA seq
687 aa
AA seq
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MKKNKIYSILAAALLFGAAPALTSCEDLLEKPSFTADDLDFVFSDEDKAELYVKGCYRAL
VFSELWRPFIDPGVTVISEDAIDGGRPRSANFAYDPILPATATTVYSQSYKTIESCNVAL
KRLAGLHETAKLKALKAEVTFIRAFAYNELIRFYGDVPAAFSPISEQQDQSWYPKRTSRD
EIYDRIIGEMQDCVDDLPWFSESNYGSAPERLTRQAAKGILARICLYAGGYSLRWDLETN
DASSLHFDRRPDEARVKELYEIADAALAEVIGKGENSLITQGRDGMSPYHTLFYNYCQRN
FGVSSQEMMWQIAQLGESTNSDFGIYNGQPGCMGGPFGGRKTLQVKLPTYYLSFDPADMR
RDVICANYSITFLSDAEKFDGTNCATTFSSIMPGKYRIQWCQAPQAAAKRNVDVPLLRYA
DILLMYAETQNYLHGPNDAAKAALKQVRDRAGIGAMPIAAANKEEFLETIMQERKWELGD
ELLVRGDLIRMNLIEKEVRQAQQDIKDLSDRTGKYADVPALRIVKLQMSSCEYGEKALTV
PYIEISDPAEISKLTAMKNASTASNRNKHNQAVKEVLAAHGITPSDSEVWYTVNMFQAWT
STYNKNSRRCAGYSPAAITALNIGSTVYTKPLASSENNGAYPDWVAGEYGIYHGFVKNKT
EICPFAGKSAGHPLIDNPNLTQHPAYK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaacaaaatatatagcatcctcgcggctgcccttctcttcggtgccgccccg
gcgctcacctcatgcgaggatctgctggagaaaccgtcattcactgctgatgaccttgat
ttcgttttttctgacgaagacaaggcagaactttacgtgaaaggctgctaccgcgcactc
gtcttctctgaactctggcgtccattcattgatccgggtgtcactgtaatcagcgaggac
gcgattgacggcggacgcccccgttcagcaaacttcgcctatgaccccatcctccccgca
acagccactaccgtctacagccagtcatacaagaccatcgaatcctgcaacgttgcgctc
aaacgccttgccggactccatgagactgctaagctcaaagcattgaaagctgaggtgact
ttcatccgggctttcgcatacaacgaacttatccgcttctatggcgatgtgcctgccgct
ttttcaccgatcagcgaacagcaggaccagtcatggtatcctaagcgcaccagccgcgat
gagatctatgaccgtatcatcggagagatgcaggactgtgtggacgatctcccctggttc
tctgaatcaaattacggttctgccccggaacgtctgacccgtcaggccgcaaaaggcatt
cttgcacgtatctgtctgtatgcaggcggttactctctgcgttgggaccttgagaccaac
gatgcctcttcgctccactttgaccgtcgcccggatgaagcccgcgtgaaagaactttat
gaaatcgcagatgccgctcttgcagaggtaatcggaaaaggtgaaaacagcctcatcacc
cagggtcgcgacggcatgagcccctatcatactcttttctacaactactgccagcgcaat
ttcggtgtcagctctcaggaaatgatgtggcagatagcccagcttggcgaatcaaccaac
tcggatttcggtatctacaacggacagcccggatgtatgggtggccccttcggcggccgc
aagactctccaggtcaaactgcctacgtattacctttcgtttgatccggcagatatgcgt
cgcgatgtgatctgcgccaactactctatcacattccttagcgatgctgaaaagttcgat
ggtacaaactgcgctaccactttctcaagcatcatgcccggcaaataccgcatccagtgg
tgtcaggctcctcaggctgctgcaaaacgcaacgttgacgtgcctcttctgcgctatgcc
gacatacttctcatgtatgccgaaacccagaactacctccacggccccaatgacgccgcc
aaagctgctctaaagcaggttcgcgaccgagccggaatcggagccatgcctatcgcagcc
gctaacaaggaagaattcctcgaaaccatcatgcaggaacgcaaatgggaacttggcgat
gaacttcttgtccgtggcgaccttatccgcatgaaccttatcgaaaaggaagtgcgccag
gctcagcaggacatcaaggatctttcagaccgcacaggcaaatatgccgatgtccccgct
ctgcgcattgtcaaactccagatgagttcatgcgaatatggcgaaaaggctctcacagtg
ccatatatcgaaatctcagatccggctgaaatttccaaactcacagccatgaagaatgcc
tcgaccgcaagcaaccgaaacaagcacaatcaggctgtgaaggaagttcttgcagcacac
ggcataactccctctgacagcgaagtctggtacactgtaaacatgttccaggcctggaca
agcacatataacaagaactcccgccgctgcgccggttactctcccgccgcgataaccgcc
ctcaacatcggctctacagtttataccaaaccgcttgccagttccgaaaacaacggagca
tatcccgactgggttgcaggagaatacggtatttatcacggtttcgtcaagaacaaaacc
gagatttgcccgtttgccggcaagagcgcaggtcatccgctgatcgacaaccccaacctt
acccagcatcccgcctacaagtaa
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